Optimizing the creation of base populations for aquaculture breeding programs using phenotypic and genomic data and its consequences on genetic progress

The success of an aquaculture breeding program critically depends on the way in which the base population of breeders is constructed since all the genetic variability for the traits included originally in the breeding goal as well as those to be included in the future is contained in the initial founders. Traditionally, base populations were created from a number of wild strains by sampling equal numbers from each strain. However, for some aquaculture species improved strains are already available and, therefore, mean phenotypic values for economically important traits can be used as a criterion to optimize the sampling when creating base populations. Also, the increasing availability of genome-wide genotype information in aquaculture species could help to refine the estimation of relationships within and between candidate strains and, thus, to optimize the percentage of individuals to be sampled from each strain. This study explores the advantages of using phenotypic and genome-wide information when constructing base populations for aquaculture breeding programs in terms of initial and subsequent trait performance and genetic diversity level. Results show that a compromise solution between diversity and performance can be found when creating base populations. Up to 6% higher levels of phenotypic performance can be achieved at the same level of global diversity in the base population by optimizing the selection of breeders instead of sampling equal numbers from each strain. The higher performance observed in the base population persisted during 10 generations of phenotypic selection applied in the subsequent breeding program.

Physical properties of peanuts related to harvesting mecanization.

This study on the mechanical properties of peanuts intended complete information on the suitability to mechanize the varieties that had been of interest in the production tests made in Valencia (Spain). The results obtained established the basis for a breeding program.

Mechanical properties of peanut varieties

On the efforts for rationalizing the production of peanuts in Spain, one of the objectives was to obtain a well adapted variety, suitable for mechanization. We tried to get information on the characteristics that would condition the suitability of a variety to mechanized production, principally mechanical harvesting. All the characters studied would then be taken into account in a breeding program.