X-parameters based analytical design of non-linear microwave circuits Application to oscillator design

Resumen El diseño clásico de circuitos de microondas se basa fundamentalmente en el uso de los parámetros s, debido a su capacidad para caracterizar de forma exitosa el comportamiento de cualquier circuito lineal. La relación existente entre los parámetros s con los sistemas de medida actuales y con las herramientas de simulación lineal han facilitado su éxito y su uso extensivo tanto en el diseño como en la caracterización de circuitos y subsistemas de microondas. Sin embargo, a pesar de la gran aceptación de los parámetros s en la comunidad de microondas, el principal inconveniente de esta formulación reside en su limitación para predecir el comportamiento de sistemas no lineales reales. En la actualidad, uno de los principales retos de los diseñadores de microondas es el desarrollo de un contexto análogo que permita integrar tanto el modelado no lineal, como los sistemas de medidas de gran señal y los entornos de simulación no lineal, con el objetivo de extender las capacidades de los parámetros s a regímenes de operación en gran señal y por tanto, obtener una infraestructura que permita tanto la caracterización como el diseño de circuitos no lineales de forma fiable y eficiente. De acuerdo a esta filosofía, en los últimos años se han desarrollado diferentes propuestas como los parámetros X, de Agilent Technologies, o el modelo de Cardiff que tratan de proporcionar esta plataforma común en el ámbito de gran señal. Dentro de este contexto, uno de los objetivos de la presente Tesis es el análisis de la viabilidad del uso de los parámetros X en el diseño y simulación de osciladores para transceptores de microondas. Otro aspecto relevante en el análisis y diseño de circuitos lineales de microondas es la disposición de métodos analíticos sencillos, basados en los parámetros s del transistor, que permitan la obtención directa y rápida de las impedancias de carga y fuente necesarias para cumplir las especificaciones de diseño requeridas en cuanto a ganancia, potencia de salida, eficiencia o adaptación de entrada y salida, así como la determinación analítica de parámetros de diseño clave como el factor de estabilidad o los contornos de ganancia de potencia. Por lo tanto, el desarrollo de una formulación de diseño analítico, basada en los parámetros X y similar a la existente en pequeña señal, permitiría su uso en aplicaciones no lineales y supone un nuevo reto que se va a afrontar en este trabajo. Por tanto, el principal objetivo de la presente Tesis consistiría en la elaboración de una metodología analítica basada en el uso de los parámetros X para el diseño de circuitos no lineales que jugaría un papel similar al que juegan los parámetros s en el diseño de circuitos lineales de microondas. Dichos métodos de diseño analíticos permitirían una mejora significativa en los actuales procedimientos de diseño disponibles en gran señal, así como una reducción considerable en el tiempo de diseño, lo que permitiría la obtención de técnicas mucho más eficientes. Abstract In linear world, classical microwave circuit design relies on the s-parameters due to its capability to successfully characterize the behavior of any linear circuit. Thus the direct use of s-parameters in measurement systems and in linear simulation analysis tools, has facilitated its extensive use and success in the design and characterization of microwave circuits and subsystems. Nevertheless, despite the great success of s-parameters in the microwave community, the main drawback of this formulation is its limitation in the behavior prediction of real non-linear systems. Nowadays, the challenge of microwave designers is the development of an analogue framework that allows to integrate non-linear modeling, large-signal measurement hardware and non-linear simulation environment in order to extend s-parameters capabilities to non-linear regimen and thus, provide the infrastructure for non-linear design and test in a reliable and efficient way. Recently, different attempts with the aim to provide this common platform have been introduced, as the Cardiff approach and the Agilent X-parameters. Hence, this Thesis aims to demonstrate the X-parameter capability to provide this non-linear design and test framework in CAD-based oscillator context. Furthermore, the classical analysis and design of linear microwave transistorbased circuits is based on the development of simple analytical approaches, involving the transistor s-parameters, that are able to quickly provide an analytical solution for the input/output transistor loading conditions as well as analytically determine fundamental parameters as the stability factor, the power gain contours or the input/ output match. Hence, the development of similar analytical design tools that are able to extend s-parameters capabilities in small-signal design to non-linear ap- v plications means a new challenge that is going to be faced in the present work. Therefore, the development of an analytical design framework, based on loadindependent X-parameters, constitutes the core of this Thesis. These analytical nonlinear design approaches would enable to significantly improve current large-signal design processes as well as dramatically decrease the required design time and thus, obtain more efficient approaches.

Identification of a biomarker panel for colorectal cancer diagnosis

Background Malignancies arising in the large bowel cause the second largest number of deaths from cancer in the Western World. Despite progresses made during the last decades, colorectal cancer remains one of the most frequent and deadly neoplasias in the western countries. Methods A genomic study of human colorectal cancer has been carried out on a total of 31 tumoral samples, corresponding to different stages of the disease, and 33 non-tumoral samples. The study was carried out by hybridisation of the tumour samples against a reference pool of non-tumoral samples using Agilent Human 1A 60-mer oligo microarrays. The results obtained were validated by qRT-PCR. In the subsequent bioinformatics analysis, gene networks by means of Bayesian classifiers, variable selection and bootstrap resampling were built. The consensus among all the induced models produced a hierarchy of dependences and, thus, of variables. Results After an exhaustive process of pre-processing to ensure data quality--lost values imputation, probes quality, data smoothing and intraclass variability filtering--the final dataset comprised a total of 8, 104 probes. Next, a supervised classification approach and data analysis was carried out to obtain the most relevant genes. Two of them are directly involved in cancer progression and in particular in colorectal cancer. Finally, a supervised classifier was induced to classify new unseen samples. Conclusions We have developed a tentative model for the diagnosis of colorectal cancer based on a biomarker panel. Our results indicate that the gene profile described herein can discriminate between non-cancerous and cancerous samples with 94.45% accuracy using different supervised classifiers (AUC values in the range of 0.997 and 0.955)

Identification of a biomarker panel for colorectal cancer diagnosis

Background:Malignancies arising in the large bowel cause the second largest number of deaths from cancer in the Western World. Despite progresses made during the last decades, colorectal cancer remains one of the most frequent and deadly neoplasias in the western countries. Methods: A genomic study of human colorectal cancer has been carried out on a total of 31 tumoral samples, corresponding to different stages of the disease, and 33 non-tumoral samples. The study was carried out by hybridisation of the tumour samples against a reference pool of non-tumoral samples using Agilent Human 1A 60-mer oligo microarrays. The results obtained were validated by qRT-PCR. In the subsequent bioinformatics analysis, gene networks by means of Bayesian classifiers, variable selection and bootstrap resampling were built. The consensus among all the induced models produced a hierarchy of dependences and, thus, of variables. Results: After an exhaustive process of pre-processing to ensure data quality--lost values imputation, probes quality, data smoothing and intraclass variability filtering--the final dataset comprised a total of 8, 104 probes. Next, a supervised classification approach and data analysis was carried out to obtain the most relevant genes. Two of them are directly involved in cancer progression and in particular in colorectal cancer. Finally, a supervised classifier was induced to classify new unseen samples. Conclusions: We have developed a tentative model for the diagnosis of colorectal cancer based on a biomarker panel. Our results indicate that the gene profile described herein can discriminate between non-cancerous and cancerous samples with 94.45% accuracy using different supervised classifiers (AUC values in the range of 0.997 and 0.955).

Identification of thaumatin-like protein and aspartyl protease as new major allergens in lettuce (Lactuca sativa)

Scope: Today, about 2–8% of the population of Western countries exhibits some type of food allergy whose impact ranges from localized symptoms confined to the oral mucosa to severe anaphylactic reactions. Consumed worldwide, lettuce is a Compositae family vegetable that can elicit allergic reactions. To date, however, only one lipid transfer protein has been described in allergic reaction to lettuce. The aim of this study was to identify potential new allergens involved in lettuce allergy. Methods and results: Sera from 42 Spanish lettuce-allergic patients were obtained from pa-tients recruited at the outpatient clinic. IgE-binding proteins were detected by SDS-PAGE and immunoblotting. Molecular characterization of IgE-binding bands was performed by MS. Thaumatin was purified using the Agilent 3100 OFFGEL system. The IgE-binding bands recognized in the sera of more than 50% of patients were identified as lipid transfer protein (9 kDa), a thaumatin-like protein (26 kDa), and an aspartyl protease (35 and 45 kDa). ELISA inhibition studies were performed to confirm the IgE reactivity of the purified allergen. Conclusion: Two new major lettuce allergens—a thaumatin-like protein and an aspartyl protease—have been identified and characterized. These allergens may be used to improve both diagnosis and treatment of lettuce-allergic patients.

Desarrollo de un sistema automático de medida para el control del consumo en sistemas empotrados

El Grupo de Diseño Electrónico y Microelectrónico de la Universidad Politécnica de Madrid -GDEM- se dedica, entre otras cosas, al estudio y mejora del consumo en sistemas empotrados. Es en este lugar y sobre este tema donde el proyecto a exponer ha tomado forma y desarrollo. Según un artículo de la revista online Revista de Electrónica Embebida, un sistema empotrado o embebido es aquel “sistema controlado por un microprocesador y que gracias a la programación que incorpora o que se le debe incorporar, realiza una función específica para la que ha sido diseñado, integrando en su interior la mayoría de los elementos necesarios para realizar dicho función”. El porqué de estudiar sobre este tema responde a que, cada vez, hay mayor presencia de sistemas empotrados en nuestra vida cotidiana. Esto es debido a que se está tendiendo a dotar de “inteligencia” a todo lo que puedan hacer nuestra vida un poco más fácil. Nos podemos encontrar dichos sistemas en fábricas, oficinas de atención a los ciudadanos, sistemas de seguridad de hogar, relojes, móviles, lavadoras, hornos, aspiradores y un largo etcétera en cualquier aparato que nos podamos imaginar. A pesar de sus grandes ventajas, aún hay grandes inconvenientes. El mayor problema que supone a día de hoy es la autonomía del mismo sistema, ya que hablamos de aparatos que muchas veces están alimentados por baterías -para ayudar a su portabilidad–. Por esto, se está intentando dotar a dichos sistemas de una capacidad de ahorro de energía y toma de decisiones que podrían ayudar a duplicar la autonomía de dicha batería. Un ejemplo claro son los Smartphones de hoy en día, unos aparatos casi indispensables que pueden tener una autonomía de un día. Esto es poco práctico para el usuario en caso de viajes, trabajo u otras situaciones en las que se le dé mucho uso y no pueda tener acceso a una red eléctrica. Es por esto que surge la necesidad de investigar, sin necesidad de mejorar el hardware del sistema, una manera de mejorar esta situación. Este proyecto trabajará en esa línea creando un sistema automático de medida el cual generará las corrientes que servirán como entrada para verificar el sistema de adquisición que junto con la tarjeta Beagle Board permitirá la toma de decisiones en relación con el consumo de energía. Para realizar este sistema, nos ayudaremos de diferentes herramientas que podremos encontrar en el laboratorio del GDEM, como la fuente de alimentación Agilent y la Beagle Board –como principales herramientas de trabajo- . El objetivo principal será la simulación de unas señales que, después de pasar un proceso de conversión y tratado, harán la función de representación del consumo de cada una de las partes que pueden formar un sistema empotrado genérico. Por lo tanto, podemos decir que el sistema hará la funcionalidad de un banco de pruebas que ayudará a simular dicho consumo para que el microprocesador del sistema pueda llegar a tomar alguna decisión. ABSTRACT. The Electronic and Microelectronic Design Group of Universidad Politécnica de Madrid -GDEM- is in charge, between other issues, of improving the embedded system’s consumption. It is in this place and about this subject where the exposed project has taken shape and development. According to an article from de online magazine Revista de Electronica Embebida, an embedded system is “the one controlled by a microprocessor and, thanks to the programing that it includes, it carries out a specific function what it has been designed for, being integrated in it the most necessary elements for realizing the already said function”. The because of studying this subject, answers that each time there is more presence of the embedded system in our daily life. This is due to the tendency of providing “intelligence” to all what can make our lives easier. We can find this kind of systems in factories, offices, security systems, watchers, mobile phones, washing machines, ovens, hoovers and, definitely, in all kind of machines what we can think of. Despite its large vantages, there are still some inconveniences. Nowadays, the most important problem is the autonomy of the system itself when machines that have to be supplied by batteries –making easier the portability-. Therefore, this project is going after a save capacity of energy for the system as well as being able to take decisions in order to duplicate batteries’ autonomy. Smartphones are a clear example. They are a very successful product but the autonomy is just one day. This is not practical for users, at all, if they have to travel, to work or to do any activity that involves a huge use of the phone without a socket nearby. That is why the need of investigating a way to improve this situation. This project is working on this line, creating an automatic system that will generate the currents for verifying the acquisition system that, with the beagle board, will help taking decisions regarding the energy’s consumption. To carry out this system, we need different tools that we can find in the laboratory of the group previously mentioned, like power supply Agilent and the Beagle Board – as main working tools –. The main goal is the simulation of some signals that, after a conversion process, will represent de consumption of each of the parts in the embedded generic system. Therefore, the system will be a testing ground that simulate the consumption, once sent to the processor, to be processed and so the microprocessor system might take some decision.