Xylella fastidiosa comparative genomic database is an information resource to explore the annotation, genomic features, and biology of different strains


Autoria(s): Varani, Alessandro M.; Monteiro-Vitorello, Claudia B.; de Almeida, Luiz G. P.; Souza, Rangel C.; Cunha, Oberdan L.; Lima, Wanessa C.; Civerolo, Edwin; Sluys, Marie Anne van; Vasconcelos, Ana T. R.
Contribuinte(s)

UNIVERSIDADE DE SÃO PAULO

Data(s)

05/11/2013

05/11/2013

2012

Resumo

The Xylella fastidiosa comparative genomic database is a scientific resource with the aim to provide a user-friendly interface for accessing high-quality manually curated genomic annotation and comparative sequence analysis, as well as for identifying and mapping prophage-like elements, a marked feature of Xylella genomes. Here we describe a database and tools for exploring the biology of this important plant pathogen. The hallmarks of this database are the high quality genomic annotation, the functional and comparative genomic analysis and the identification and mapping of prophage-like elements. It is available from web site http://www.xylella.lncc.br.

FAPESP (Sao Paulo, SP, Brazil)

FAPESP (Sao Paulo, SP, Brazil)

CAPES/CNPq (Brasilia, DF, Brazil)

CAPES/CNPq (Brasilia, DF, Brazil)

USDAARS

USDA-ARS

Identificador

GENETICS AND MOLECULAR BIOLOGY, RIBEIRAO PRET, v. 35, n. 1, supl., Part 3, pp. 149-152, MAR, 2012

1415-4757

http://www.producao.usp.br/handle/BDPI/41692

10.1590/S1415-47572012005000019

http://dx.doi.org/10.1590/S1415-47572012005000019

Idioma(s)

eng

Publicador

SOC BRASIL GENETICA

RIBEIRAO PRET

Relação

GENETICS AND MOLECULAR BIOLOGY

Direitos

openAccess

Copyright SOC BRASIL GENETICA

Palavras-Chave #GENOME ANNOTATION AND ASSEMBLY #COMPARATIVE GENOMICS #MOBILE GENETIC ELEMENTS #BIOCHEMISTRY & MOLECULAR BIOLOGY #GENETICS & HEREDITY
Tipo

article

original article

publishedVersion