Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168


Autoria(s): Santos, Camila R.; Paiva, Joice H.; Sforca, Mauricio L.; Neves, Jorge L.; Navarro, Rodrigo Z.; Cota, Junio; Akao, Patricia K.; Hoffmam, Zaira B.; Meza, Andreia N.; Smetana, Juliana H.; Nogueira, Maria L.; Polikarpov, Igor; Xavier-Neto, Jose; Squina, Fabio M.; Ward, Richard J.; Ruller, Roberto; Zeri, Ana C.; Murakami, Mario T.
Contribuinte(s)

UNIVERSIDADE DE SÃO PAULO

Data(s)

05/11/2013

05/11/2013

2012

Resumo

Cellulases participate in a number of biological events, such as plant cell wall remodelling, nematode parasitism and microbial carbon uptake. Their ability to depolymerize crystalline cellulose is of great biotechnological interest for environmentally compatible production of fuels from lignocellulosic biomass. However, industrial use of cellulases is somewhat limited by both their low catalytic efficiency and stability. In the present study, we conducted a detailed functional and structural characterization of the thermostable BsCe15A (Bacillus subtilis cellulase 5A), which consists of a GH5 (glycoside hydrolase 5) catalytic domain fused to a CBM3 (family 3 carbohydrate-binding module). NMR structural analysis revealed that the Bacillus CBM3 represents a new subfamily, which lacks the classical calcium-binding motif, and variations in NMR frequencies in the presence of cellopentaose showed the importance of polar residues in the carbohydrate interaction. Together with the catalytic domain, the CBM3 forms a large planar surface for cellulose recognition, which conducts the substrate in a proper conformation to the active site and increases enzymatic efficiency. Notably, the manganese ion was demonstrated to have a hyper-stabilizing effect on BsCel5A, and by using deletion constructs and X-ray crystallography we determined that this effect maps to a negatively charged motif located at the opposite face of the catalytic site.

Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP)

Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP) [10/51890-8]

Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq)

Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq) [476043/2011-5]

Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES)

Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES)

Identificador

BIOCHEMICAL JOURNAL, LONDON, v. 441, n. 8, supl. 1, Part 1, pp. 95-104, 36892, 2012

0264-6021

http://www.producao.usp.br/handle/BDPI/41422

10.1042/BJ20110869

http://dx.doi.org/10.1042/BJ20110869

Idioma(s)

eng

Publicador

PORTLAND PRESS LTD

LONDON

Relação

BIOCHEMICAL JOURNAL

Direitos

restrictedAccess

Copyright PORTLAND PRESS LTD

Palavras-Chave #ACCESSORY DOMAIN #CELLULASE 5A #CARBOHYDRATE-BINDING MODULE #KINETICS #STRUCTURE #THERMAL STABILITY #CARBOHYDRATE-BINDING MODULES #SMALL-ANGLE SCATTERING #CLOSTRIDIUM-THERMOCELLUM #THERMOTOGA-MARITIMA #BIOCHEMICAL-CHARACTERIZATION #BIOLOGICAL MACROMOLECULES #THERMAL-STABILITY #CRYSTAL-STRUCTURE #ESCHERICHIA-COLI #NMR #BIOCHEMISTRY & MOLECULAR BIOLOGY
Tipo

article

original article

publishedVersion