Energy localization in the Peyrard-Bishop DNA model
Contribuinte(s) |
Universidade Estadual Paulista (UNESP) |
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Data(s) |
20/05/2014
20/05/2014
01/08/2004
|
Resumo |
We study energy localization on the oscillator chain proposed by Peyrard and Bishop to model DNA. We search numerically for conditions with initial energy in a small subgroup of consecutive oscillators of a finite chain and such that the oscillation amplitude is small outside this subgroup on a long time scale. We use a localization criterion based on the information entropy and verify numerically that such localized excitations exist when the nonlinear dynamics of the subgroup oscillates with a frequency inside the reactive band of the linear chain. We predict a mimium value for the Morse parameter (mu>2.25) (the only parameter of our normalized model), in agreement with the numerical calculations (an estimate for the biological value is mu=6.3). For supercritical masses, we use canonical perturbation theory to expand the frequencies of the subgroup and we calculate an energy threshold in agreement with the numerical calculations. |
Formato |
9 |
Identificador |
http://dx.doi.org/10.1103/PhysRevE.70.026213 Physical Review E. College Pk: Amer Physical Soc, v. 70, n. 2, 9 p., 2004. 1539-3755 http://hdl.handle.net/11449/35010 10.1103/PhysRevE.70.026213 WOS:000223784600042 WOS000223784600042.pdf |
Idioma(s) |
eng |
Publicador |
Amer Physical Soc |
Relação |
Physical Review E |
Direitos |
closedAccess |
Tipo |
info:eu-repo/semantics/article |