Combined Crystallographic and Solution Molecular Dynamics Study of Allosteric Effects in Ester and Ketone p-tert-Butylcalix[4]arene Derivatives and Their Complexes with Acetonitrile, Cd(II), and Pb(II)
Contribuinte(s) |
UNIVERSIDADE DE SÃO PAULO |
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Data(s) |
20/10/2012
20/10/2012
2008
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Resumo |
We describe here a procedure to bridge the gap in the field of calixarene physicochemistry between solid-state atomic-resolution structural information and the liquid-state low-resolution thermodynamics and spectroscopic data. We use MD simulations to study the kinetics and energetics involved in the complexation of lower rim calix[4]arene derivatives (L), containing bidentate ester (1) and ketone (2) pendant groups, with acetonitrile molecule (MeCN) and Cd2+ and Pb2+ ions (M2+) in acetonitrile solution. On one hand, we found that the prior inclusion of MeCN into the calix to form a L(MeCN) adduct has only a weak effect in preorganizing the hydrophilic cavity toward metal ion binding. On the other hand, the strong ion-hydrophilic cavity interaction produces a wide open calix which enhances the binding of one MeCN molecule (allosteric effect) to stabilize the whole (M2+)1(MeCN) bifunctional complex. We reach two major conclusions: (i) the MD results for the (M2+)1(MeCN) binding are in close agreement with the ""endo"", fully encapsulated, metal complex found by X-ray diffraction and in vacuo MD calculations, and (ii) the MD structure for the more flexible 2 ligand, however, differs from the also endo solid-state molecule. In fact, it shows strong solvation effects at the calixarene lower bore by competing MeCN molecules that share the metal coordination sphere with the four C=O oxygens of an ""exo"" (M2+)2(MeCN) complex. European Commission European Commission[ICA3-CT-2000-30006] FAPESP (Brazil)[01/10750-0] Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) CONICET (Argentina) Consejo Nacional de Investigaciones Científicas y Técnicas de Argentina (CONICET) |
Identificador |
JOURNAL OF PHYSICAL CHEMISTRY A, v.112, n.46, p.11885-11894, 2008 1089-5639 http://producao.usp.br/handle/BDPI/29989 10.1021/jp804198c |
Idioma(s) |
eng |
Publicador |
AMER CHEMICAL SOC |
Relação |
Journal of Physical Chemistry A |
Direitos |
restrictedAccess Copyright AMER CHEMICAL SOC |
Palavras-Chave | #ALKALI-METAL CATIONS #PARTICLE MESH EWALD #SOLUTION THERMODYNAMICS #LOWER RIM #SIMULATIONS #BINDING #SODIUM #Chemistry, Physical #Physics, Atomic, Molecular & Chemical |
Tipo |
article original article publishedVersion |