Controlled dehydration of a ruthenium complex-DNA crystal induces reversible DNA kinking


Autoria(s): Hall, J. P.; Sanchez-Weatherby, Juan; Alberti, Cora; Hurtado Quimper, Caroline; O'Sullivan, Kyra; Brazier, John A.; Winter, Graeme; Sorensen, Thomas; Kelly, John M.; Cardin, David J.; Cardin, Christine J.
Data(s)

17/12/2014

Resumo

Hydration-dependent DNA deformation has been known since Rosalind Franklin recognised that the relative humidity of the sample had to be maintained to observe a single conformation in DNA fibre diffraction. We now report for the first time the crystal structure, at the atomic level, of a dehydrated form of a DNA duplex and demonstrate the reversible interconversion to the hydrated form at room temperature. This system, containing d(TCGGCGCCGA) in the presence of Λ-[Ru(TAP)2(dppz)]2+ (TAP = 1,4,5,8-tetraazaphenanthrene, dppz = dipyridophenazine), undergoes a partial transition from an A/B hybrid to the A-DNA conformation, at 84-79% relative humidity. This is accompanied by an increase in kink at the central step from 22° to 51°, with a large movement of the terminal bases forming the intercalation site. This transition is reversible on rehydration. Seven datasets, collected from one crystal at room temperature, show the consequences of dehydration at near-atomic resolution. This result highlights that crystals, traditionally thought of as static systems, are still dynamic and therefore can be the subject of further experimentation.

Formato

text

Identificador

http://centaur.reading.ac.uk/40118/1/Hydration_Dehydration_V3.pdf

Hall, J. P. <http://centaur.reading.ac.uk/view/creators/90005596.html>, Sanchez-Weatherby, J., Alberti, C., Hurtado Quimper, C., O'Sullivan, K., Brazier, J. A. <http://centaur.reading.ac.uk/view/creators/90001010.html>, Winter, G., Sorensen, T., Kelly, J. M., Cardin, D. J. <http://centaur.reading.ac.uk/view/creators/90002720.html> and Cardin, C. J. <http://centaur.reading.ac.uk/view/creators/90000060.html> (2014) Controlled dehydration of a ruthenium complex-DNA crystal induces reversible DNA kinking. Journal of the American Chemical Society, 136 (50). pp. 17505-17512. ISSN 0002-7863 doi: 10.1021/ja508745x <http://dx.doi.org/10.1021/ja508745x>

Idioma(s)

en

Publicador

American Chemical Society

Relação

http://centaur.reading.ac.uk/40118/

creatorInternal Hall, J. P.

creatorInternal Brazier, John A.

creatorInternal Cardin, David J.

creatorInternal Cardin, Christine J.

http://pubs.acs.org/doi/abs/10.1021/ja508745x

10.1021/ja508745x

Tipo

Article

PeerReviewed