The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution


Autoria(s): ELSIK, Christine G.; TELLAM, Ross L.; WORLEY, Kim C.; GIBBS, Richard A.; ABATEPAULO, Antonio R. R.; ABBEY, Colette A.; ADELSON, David L.; AERTS, Jan; AHOLA, Virpi; ALEXANDER, Lee; ALIOTO, Tyler; ALMEIDA, Iassudara G.; AMADIO, Ariel F.; ANATRIELLO, Elen; ANTONARAKIS, Stylianos E.; ANZOLA, Juan M.; ASTASHYN, Alex; BAHADUE, Suria M.; BALDWIN, Cynthia L.; BARRIS, Wes; BAXTER, Rebecca; BELL, Stephanie Nicole; BENNETT, Anna K.; BENNETT, Gary L.; BIASE, Fernando H.; BOLDT, Clayton R.; BRADLEY, Daniel G.; BRINKMAN, Fiona S. L.; BRINKMEYER-LANGFORD, Candice L.; BROWN, Wendy C.; BROWNSTEIN, Michael J.; BUHAY, Christian; CAETANO, Alexandre R.; CAMARA, Francisco; CARROLL, Jeffrey A.; CARVALHO, Wanessa A.; CASEY, Theresa; CERVELATTI, Elaine P.; CHACK, Joseph; CHACKO, Elsa; CHANDRABOSE, Mimi M.; CHAPIN, Jennifer E.; CHAPPLE, Charles E.; CHEN, Hsiu-Chuan; CHEN, Lin; CHENG, Ye; CHENG, Ze; CHILDERS, Christopher P.; CHITKO-MCKOWN, Carol G.; CHIU, Readman; CHOI, Jungwoo; CHRAST, Jacqueline; COLLEY, Adam J.; CONNELLEY, Tomothy; CREE, Andy; CURRY, Stacey; DALRYMPLE, Brian; DAO, Marvin Diep; DAVIS, Clay; OLIVEIRA, Carlo J. F. de; SANTOS, Isabel K. F. de Miranda; CAMPOS, Tatiana A. de; DEOBALD, Heather; DEVINOY, Eve; DICKINS, C. Michael; YAN, Ding; DINH, Huyen H.; DONATO, Marcos De; DONOHUE, Kaitlin E.; DONTHU, Ravikiran; DOVC, Peter; DUGAN-ROCHA, Shannon; DURBIN, K. James; EBERLEIN, Annett; EDGAR, Robert C.; EGAN, Amy; EGGEN, Andre; EICHLER, Evan E.; ELHAIK, Eran; ELLIS, Shirley A.; ELNITSKI, Laura; ERMOLAEVA, Olga; EYRAS, Eduardo; FITZSIMMONS, Carolyn J.; FOWLER, Gerald R.; FRANZIN, Alessandra M.; FRITZ, Krista; GABISI, Ramatu Ayiesha; GARCIA, Gustavo R.; GARCIA, Jose Fernando; GENINI, Sem; GERLACH, Daniel; GERMAN, J. Bruce; GILBERT, James G. R.; GILL, Clare A.; GLADNEY, Cody J.; GLASS, Elizabeth J.; GOODELL, Jason; GRANT, Jason R.; GRAUR, Dan; GREASER, Marion L.; GREEN, Jonathan A.; GREEN, Ronnie D.; GUAN, Leluo; GUIGO, Roderic; HADSELL, Darryl L.; HAGEN, Darren E.; HAKIMOV, Hatam A.; HALGREN, Rob; HAMERNIK, Debora L.; HAMILTON, Cerissa; HARHAY, Gregory P.; HARROW, Jennifer L.; HART, Elizabeth A.; HASTINGS, Nicola; HAVLAK, Paul; HENRICHSEN, Charlotte N.; HERNANDEZ, Judith; HERNANDEZ, Marta; HERZIG, Carolyn T. A.; HIENDLEDER, Stefan G.; HINES, Sandra; HITCHENS, Matthew Edward; HLAVINA, Wratko; HOBBS, Matthew; HOLDER, Michael; HOLT, Robert A.; HU, Zhi-Liang; HUME, Jennifer; IIVANAINEN, Antti; INGHAM, Aaron; ISO-TOURU, Terhi; JAMIS, Catherine; JANN, Oliver; JENSEN, Kirsty; JHANGIANI, Shalini N.; JIANG, Huaiyang; JOHNSON, Angela Jolivet; JONES, Steven J. M.; JOSHI, Vandita; JUNIER, Thomas; KAPETIS, Dimos; KAPPES, Steve M.; KAPUSTIN, Yuri; KEELE, John W.; KENT, Matthew P.; KERR, Tovah; KHALIL, Sari S.; KHATIB, Hasan; KIRYUTIN, Boris; KITTS, Paul; KOKOCINSKI, Felix; KOLBEHDARI, Davood; KOVAR, Christie L.; KRIVENTSEVA, Evgenia V.; KUMAR, Charu G.; KUMAR, Dinesh; LAHMERS, Kevin K.; LANDRUM, Melissa; LARKIN, Denis M.; LAU, Lilian P. L.; LEACH, Richard; LEE, Justin C. M.; LEE, Sandra; LEMAY, Danielle G.; LEWIN, Harris A.; LEWIS, Lora R.; LI, Changxi; LIEN, Sigbjorn; LIU, George E.; LIU, Yih-shin; LIU, Yue; LOGAN, Krystin M.; LOPEZ, John; LOZADO, Ryan J.; LUTZOW, Ylva Strandberg; LYNN, David J.; MACNEIL, Michael D.; MAGLOTT, Donna; MALINVERNI, Roberto; MAQBOOL, Nauman J.; MARQUES, Elisa; MARRA, Marco A.; MARTIN, William F.; MARTINS, Natalia F.; MARUYAMA, Sandra R.; MATUKUMALLI, Lakshmi K.; MAZZA, Raffaele; MCEWAN, John C.; MCKAY, Stephanie D.; MCLEAN, Kim L.; MCWILLIAM, Sean; MEDRANO, Juan F.; MEMILI, Erdogan; MOEN, Charles; MOLENAAR, Adrian J.; MOORE, Stephen S.; MOORE, Richard; MORE, Daniela D.; MORENO, Barbara T.; MORGAN, Margaret B.; MUNTEAN, Carl T.; MUZNY, Donna M.; NANDAKUMAR, Hari P.; NAZARETH, Lynne V.; NGUYEN, Ngoc Bich; NICHOLAS, Frank W.; NOGUEIRA, Marcelo F. G.; OKWUONU, Geoffrey O.; OLSAKER, Ingrid; PANT, Sameer D.; PANZITTA, Francesca; PASTOR, Rosemeire C. P.; PATEL, Bella Mayurkumar; PAYNE, Gemma M.; PLASS, Mireya; POLI, Mario A.; POSLUSNY, Nathan; PRUITT, Kim; PU, Ling-Ling; QIN, Xiang; RACHAGANI, Satyanarayana; RAISON, Joy M.; RANGANATHAN, Shoba; RATNAKUMAR, Abhirami; RAZPET, Andrej; REECY, James; REESE, Justin T.; REN, Yanru; REYMOND, Alexandre; RIGGS, Penny K.; RIJNKELS, Monique; RINCON, Gonzalo; ROBERTS, Andy; RODRIGUEZ-OSORIO, Nelida; RODRIGUEZ-ZAS, Sandra L.; ROMERO, Natasha E.; ROSENWALD, Anne; RUIZ, San Juana; SABO, Aniko; SALIH, Hanni; SANDO, Lillian; SANTIBANEZ, Jireh; SAPOJNIKOV, Victor; SCHEIN, Jacqueline E.; SCHMUTZ, Sheila M.; SCHNABEL, Robert D.; SCHOOK, Lawrence; SEARLE, Stephen M.; SEO, Seongwon; SHEN, Yufeng; SHEN, Libing; SHERMAN, Laura; SKOW, Loren C.; SMITH, Timothy; SNELLING, Warren M.; SODERGREN, Erica; SOLOVYEV, Victor; SONG, Henry; SONG, Jiuzhou; SONSTEGARD, Tad S.; SOUTHEY, Bruce R.; SOUVOROV, Alexandre; SPURLOCK, Diane; STEFFEN, David; STONE, Roger T.; STOTHARD, Paul; SUGIMOTO, Yoshikazu; SWEEDLER, Jonathan V.; TAKASUGA, Akiko; TAMMEN, Imke; TANIGUCHI, Masaaki; TAYLOR, Jeremy F.; TELUGU, Bhanu Prakash V. L.; UCLA, Catherine; URBANSKI, Jennifer M.; UTSUNOMIYA, Yuri T.; VAN, Curtis P.; VATTATHIL, Selina; VERSCHOOR, Chris P.; WAARDENBERG, Ashley J.; WALKER, Angela; WANG, Zhiquan; WARD, Robert; WARREN, James T.; WATERMAN, Richard C.; WEIKARD, Rosemarie; WEINSTOCK, George M.; WELSH JR., Thomas H.; WHEELER, David A.; WHEELER, Thomas T.; WHITE, Stephen N.; WHITESIDE, Matthew D.; WILCZEK-BONEY, Katarzyna; WILLIAMS, John L.; WILLIAMS JR., Rex Lee; WILMING, Laurens G.; WOMACK, James; WRIGHT, Rita A.; WUNDERLICH, Kris R.; WYSS, Carine; YANG, Mary Q.; YANG, Jianqi; ZDOBNOV, Evgeny M.; ZHANG, Jingkun; ZHAO, Feng-Qi; ZHU, Bin; Bovine Genome Sequencing and Analysis Consortium
Contribuinte(s)

UNIVERSIDADE DE SÃO PAULO

Data(s)

19/10/2012

19/10/2012

2009

Resumo

To understand the biology and evolution of ruminants, the cattle genome was sequenced to about sevenfold coverage. The cattle genome contains a minimum of 22,000 genes, with a core set of 14,345 orthologs shared among seven mammalian species of which 1217 are absent or undetected in noneutherian (marsupial or monotreme) genomes. Cattle-specific evolutionary breakpoint regions in chromosomes have a higher density of segmental duplications, enrichment of repetitive elements, and species-specific variations in genes associated with lactation and immune responsiveness. Genes involved in metabolism are generally highly conserved, although five metabolic genes are deleted or extensively diverged from their human orthologs. The cattle genome sequence thus provides a resource for understanding mammalian evolution and accelerating livestock genetic improvement for milk and meat production.

National Human Genome Research Institute (NHGRI/NIH)[U54 HG003273]

U.S. Department of Agriculture`s Agricultural Research Service[59-0790-3-196]

Cooperative State Research, Education, and Extension Service National Research Initiative[2004-35216-14163]

the state of Texas

Genome British Columbia

Alberta Science and Research Authority

Commonwealth Scientific and Industrial Research Organization of Australia (CSIRO)

Agritech Investments Ltd

Dairy Insight, Inc

AgResearch Ltd.

Research Council of Norway

Kleberg Foundation

National, Texas, and South Dakota Beef Check-off Funds

Identificador

SCIENCE, v.324, n.5926, p.522-528, 2009

0036-8075

http://producao.usp.br/handle/BDPI/24931

10.1126/science.1169588

http://dx.doi.org/10.1126/science.1169588

Idioma(s)

eng

Publicador

AMER ASSOC ADVANCEMENT SCIENCE

Relação

Science

Direitos

closedAccess

Copyright AMER ASSOC ADVANCEMENT SCIENCE

Palavras-Chave #MAMMALIAN CHROMOSOME EVOLUTION #NEONATAL FC-RECEPTOR #GENE-EXPRESSION #BOVINE #ORGANIZATION #INTERFERON #FAMILY #ROLES #SINES #MAPS #Multidisciplinary Sciences
Tipo

article

original article

publishedVersion