Crystallization and preliminary X-ray diffraction analysis of recombinant chlorocatechol 1,2-dioxygenase from Pseudomonas putida


Autoria(s): RUSTIGUEL, Joane Kathelen; PINHEIRO, Matheus Pinto; ARAUJO, Ana Paula Ulian; NONATO, Maria Cristina
Contribuinte(s)

UNIVERSIDADE DE SÃO PAULO

Data(s)

19/04/2012

19/04/2012

2011

Resumo

Chlorocatechol 1,2-dioxygenase from the Gram-negative bacterium Pseudomonas putida (Pp 1,2-CCD) is considered to be an important biotechnological tool owing to its ability to process a broad spectrum of organic pollutants. In the current work, the crystallization, crystallographic characterization and phasing of the recombinant Pp 1,2-CCD enzyme are described. Reddish-brown crystals were obtained in the presence of polyethylene glycol and magnesium acetate by utilizing the vapour-diffusion technique in sitting drops. Crystal dehydration was the key step in obtaining data sets, which were collected on the D03B-MX2 beamline at the CNPEM/MCT - LNLS using a MAR CCD detector. Pp 1,2-CCD crystals belonged to space group P6(1)22 and the crystallographic structure of Pp 1,2-CCD has been solved by the MR-SAD technique using Fe atoms as scattering centres and the coordinates of 3-chlorocatechol 1,2-dioxygenase from Rhodococcus opacus (PDB entry <externallink type=""url"" id=""http://scripts.iucr.org/cgi-bin/explore.cgi?pdbid=2boy"">2boy) as the search model. The initial model, which contains three molecules in the asymmetric unit, has been refined to 3.4 A resolution.

FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)[2008/01743-9]

FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)[2008/07077-0]

Identificador

ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY AND CRYSTALLIZATION COMMUNICATIONS, v.67, p.507-509, 2011

1744-3091

http://producao.usp.br/handle/BDPI/16607

10.1107/S174430911100635X

http://dx.doi.org/10.1107/S174430911100635X

Idioma(s)

eng

Publicador

WILEY-BLACKWELL

Relação

Acta Crystallographica Section F-structural Biology and Crystallization Communications

Direitos

restrictedAccess

Copyright WILEY-BLACKWELL

Palavras-Chave #bioremediation #dioxygenases #polycyclic aromatic hydrocarbons #POLYCYCLIC AROMATIC-HYDROCARBONS #RHODOCOCCUS-OPACUS 1CP #CRYSTAL-STRUCTURE #CATECHOL 1,2-DIOXYGENASE #MICROBIAL-DEGRADATION #PROTEIN CRYSTALS #BIODEGRADATION #PURIFICATION #CATALYSIS #PATHWAY
Tipo

article

original article

publishedVersion