Exploring the Consequences of a Representative ``Disallowed'' Conformation of Aib on a 3(10)-Helical Fold


Autoria(s): Tumminakatti, Shama; Reddy, Damodara N; Prabhakaran, Erode N
Data(s)

2015

Resumo

The structural effects of a representative disallowed conformation of Aib on the 3(10)-helical fold of an octapeptidomimetic are explored. The 1D (H-1, C-13) & 2D NMR, FT-IR and CD data reveal that the octapeptide 1, adopts a 3(10)-helical conformation in solution, as it does in its crystal structure. The C-terminal methyl carboxylate (CO2Me) of 1 was modified into an 1,3-oxazine (Oxa) functional group in the peptidomimetic 2. This modification results in the stabilization of the backbone of the C-terminal Aib (Aib*-Oxa) of 2, in a conformation (phi, =180, 0) that is natively disallowed to Aib. Consequent to the presence of this natively disallowed conformation, the 3(10)-helical fold is not disrupted in the body of the peptidomimetic 2. But the structural distortions that do occur in 2 are primarily in residues in the immediate vicinity of the natively disallowed conformation, rather than in the whole peptide body. Non-native electronic effects resulting from modifications in backbone functional groups can be at the origin of stabilizing residues in natively disallowed conformations. (c) 2014 Wiley Periodicals, Inc. Biopolymers (Pept Sci) 104: 21-36, 2015.

Formato

application/pdf

Identificador

http://eprints.iisc.ernet.in/50993/1/bio_104-1_21_2015.pdf

Tumminakatti, Shama and Reddy, Damodara N and Prabhakaran, Erode N (2015) Exploring the Consequences of a Representative ``Disallowed'' Conformation of Aib on a 3(10)-Helical Fold. In: BIOPOLYMERS, 104 (1). pp. 21-36.

Publicador

WILEY-BLACKWELL

Relação

http://dx.doi.org/ 10.1002/bip.22599 http://dx.doi.http://dx.doi.org/ 10.1002

http://eprints.iisc.ernet.in/50993/

Palavras-Chave #Organic Chemistry
Tipo

Journal Article

PeerReviewed