Allosteric Transition Induced by Mg2+ Ion in a Transactivator Monitored by SERS


Autoria(s): Kundu, Partha P; Bhowmick, Tuhin; Swapna, Ganduri; Kumar, Pavan GV; Nagaraja, Valakunja; Narayana, Chandrabhas
Data(s)

2014

Resumo

We demonstrate the utility of the surface-enhanced Raman spectroscopy (SERS) to monitor conformational transitions in protein upon ligand binding. The changes in protein's secondary and tertiary structures were monitored using amide and aliphatic/aromatic side chain vibrations. Changes in these bands are suggestive of the stabilization of the secondary and tertiary structure of transcription activator protein C in the presence of Mg2+ ion, whereas the spectral fingerprint remained unaltered in the case of a mutant protein, defective in Mg2+ binding. The importance of the acidic residues in Mg2+ binding, which triggers an overall allosteric transition in the protein, is visualized in the molecular model. The present study thus opens up avenues toward the application of SERS as a potential tool for gaining structural insights into the changes occurring during conformational transitions in proteins.

Formato

application/pdf

Identificador

http://eprints.iisc.ernet.in/49299/1/jou_phy_che-B118-20_5322_2014.pdf

Kundu, Partha P and Bhowmick, Tuhin and Swapna, Ganduri and Kumar, Pavan GV and Nagaraja, Valakunja and Narayana, Chandrabhas (2014) Allosteric Transition Induced by Mg2+ Ion in a Transactivator Monitored by SERS. In: JOURNAL OF PHYSICAL CHEMISTRY B, 118 (20). pp. 5322-5330.

Publicador

AMER CHEMICAL SOC

Relação

http://dx.doi.org/10.1021/jp5000733

http://eprints.iisc.ernet.in/49299/

Palavras-Chave #Microbiology & Cell Biology #Physics
Tipo

Journal Article

PeerReviewed