Stochastic linear multistep methods for the simulation of chemical kinetics


Autoria(s): Barrio, Manuel; Burrage, Kevin; Burrage, Pamela
Data(s)

14/02/2015

Resumo

In this paper, we introduce the Stochastic Adams-Bashforth (SAB) and Stochastic Adams-Moulton (SAM) methods as an extension of the tau-leaping framework to past information. Using the theta-trapezoidal tau-leap method of weak order two as a starting procedure, we show that the k-step SAB method with k >= 3 is order three in the mean and correlation, while a predictor-corrector implementation of the SAM method is weak order three in the mean but only order one in the correlation. These convergence results have been derived analytically for linear problems and successfully tested numerically for both linear and non-linear systems. A series of additional examples have been implemented in order to demonstrate the efficacy of this approach.

Identificador

http://eprints.qut.edu.au/87636/

Publicador

A I P Publishing LLC

Relação

DOI:10.1063/1.4907008

Barrio, Manuel, Burrage, Kevin, & Burrage, Pamela (2015) Stochastic linear multistep methods for the simulation of chemical kinetics. The Journal of Chemical Physics, 142, 064101-1.

Direitos

Copyright 2015 AIP Publishing LLC

Fonte

ARC Centre of Excellence for Mathematical & Statistical Frontiers (ACEMS); School of Mathematical Sciences; Science & Engineering Faculty

Palavras-Chave #010399 Numerical and Computational Mathematics not elsewhere classified #stochastic numerical methods #tau-leap methods #chemical kinetics
Tipo

Journal Article