Bayesian parametric bootstrap for models with intractable likelihoods
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23/08/2015
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Resumo |
In this paper it is demonstrated how the Bayesian parametric bootstrap can be adapted to models with intractable likelihoods. The approach is most appealing when the semi-automatic approximate Bayesian computation (ABC) summary statistics are selected. After a pilot run of ABC, the likelihood-free parametric bootstrap approach requires very few model simulations to produce an approximate posterior, which can be a useful approximation in its own right. An alternative is to use this approximation as a proposal distribution in ABC algorithms to make them more efficient. In this paper, the parametric bootstrap approximation is used to form the initial importance distribution for the sequential Monte Carlo and the ABC importance and rejection sampling algorithms. The new approach is illustrated through a simulation study of the univariate g-and- k quantile distribution, and is used to infer parameter values of a stochastic model describing expanding melanoma cell colonies. |
Formato |
application/pdf |
Identificador | |
Relação |
http://eprints.qut.edu.au/86986/1/PB_intractable_likelihoods.pdf Vo, Brenda N., Drovandi, Christopher C., & Pettitt, Anthony N. (2015) Bayesian parametric bootstrap for models with intractable likelihoods. [Working Paper] (Unpublished) http://purl.org/au-research/grants/ARC/DP110100159 |
Direitos |
Copyright 2015 QUT & the Authors |
Fonte |
ARC Centre of Excellence for Mathematical & Statistical Frontiers (ACEMS); School of Mathematical Sciences; Science & Engineering Faculty |
Palavras-Chave | #010402 Biostatistics #010406 Stochastic Analysis and Modelling #060113 Synthetic Biology #Bayesian bootstrap #Approximate Bayesian computation #sequential Monte Carlo #melanoma cell spreading #importance sampling #quantile distribution |
Tipo |
Working Paper |