Models of collective cell spreading with variable cell aspect ratio : a motivation for degenerate diffusion models


Autoria(s): Simpson, Matthew; Baker, Ruth; McCue, Scott W.
Data(s)

2011

Resumo

Continuum diffusion models are often used to represent the collective motion of cell populations. Most previous studies have simply used linear diffusion to represent collective cell spreading, while others found that degenerate nonlinear diffusion provides a better match to experimental cell density profiles. In the cell modeling literature there is no guidance available with regard to which approach is more appropriate for representing the spreading of cell populations. Furthermore, there is no knowledge of particular experimental measurements that can be made to distinguish between situations where these two models are appropriate. Here we provide a link between individual-based and continuum models using a multi-scale approach in which we analyze the collective motion of a population of interacting agents in a generalized lattice-based exclusion process. For round agents that occupy a single lattice site, we find that the relevant continuum description of the system is a linear diffusion equation, whereas for elongated rod-shaped agents that occupy L adjacent lattice sites we find that the relevant continuum description is connected to the porous media equation (pme). The exponent in the nonlinear diffusivity function is related to the aspect ratio of the agents. Our work provides a physical connection between modeling collective cell spreading and the use of either the linear diffusion equation or the pme to represent cell density profiles. Results suggest that when using continuum models to represent cell population spreading, we should take care to account for variations in the cell aspect ratio because different aspect ratios lead to different continuum models.

Formato

application/pdf

Identificador

http://eprints.qut.edu.au/39400/

Publicador

American Physical Society

Relação

http://eprints.qut.edu.au/39400/1/39400.pdf

DOI:10.1103/PhysRevE.83.021901

Simpson, Matthew, Baker, Ruth, & McCue, Scott W. (2011) Models of collective cell spreading with variable cell aspect ratio : a motivation for degenerate diffusion models. Physical Review E (PRE), 83, 021901-1 .

Direitos

Copyright 2010 American Physical Society

Fonte

Faculty of Science and Technology; Institute of Health and Biomedical Innovation; Mathematical Sciences

Palavras-Chave #010202 Biological Mathematics #cell motility #cell shape #degenerate diffusion #porous media equation #cellular automata
Tipo

Journal Article