Optimal image sample size for corneal nerve morphometry

Purpose Arbitrary numbers of corneal confocal microscopy images have been used for analysis of corneal subbasal nerve parameters under the implicit assumption that these are a representative sample of the central corneal nerve plexus. The purpose of this study is to present a technique for quantifying the number of random central corneal images required to achieve an acceptable level of accuracy in the measurement of corneal nerve fiber length and branch density. Methods Every possible combination of 2 to 16 images (where 16 was deemed the true mean) of the central corneal subbasal nerve plexus, not overlapping by more than 20%, were assessed for nerve fiber length and branch density in 20 subjects with type 2 diabetes and varying degrees of functional nerve deficit. Mean ratios were calculated to allow comparisons between and within subjects. Results In assessing nerve branch density, eight randomly chosen images not overlapping by more than 20% produced an average that was within 30% of the true mean 95% of the time. A similar sampling strategy of five images was 13% within the true mean 80% of the time for corneal nerve fiber length. Conclusions The “sample combination analysis” presented here can be used to determine the sample size required for a desired level of accuracy of quantification of corneal subbasal nerve parameters. This technique may have applications in other biological sampling studies.

Morphometry and abnormalities of the feet of Kaimanawa feral horses in New Zealand

Objective: The present study investigated the foot health of the Kaimanawa feral horse population and tested the hypotheses that horses would have a large range of foot morphology and that the incidence of foot abnormality would be significantly high. Procedures: Abnormality was defined as a variation from what the two veterinarian assessors considered as optimal morphology and which was considered to impact negatively on the structure and/or function of the foot. Fifteen morphometric variables were measured on four calibrated photographic views of all four feet of 20 adult Kaimanawa feral horses. Four morphometric variables were measured from the lateromedial radiographs of the left forefoot of each horse. In addition, the study identified the incidence of gross abnormality observed on the photographs and radiographs of all 80 feet. Results: There was a large variation between horses in the morphometric dimensions, indicating an inconsistent foot type. Mean hoof variables were outside the normal range recommended by veterinarians and hoof care providers; 35% of all feet had a long toe conformation and 15% had a mediolateral imbalance. Abnormalities included lateral (85% of horses) and dorsal (90% of horses) wall flares, presence of laminar rings (80% of horses) and bull-nose tip of the distal phalanx (75% of horses). Both hypotheses were therefore accepted. Conclusions: The Kaimanawa feral horse population demonstrated a broad range of foot abnormalities and we propose that one reason for the questionable foot health and conformation is lack of abrasive wearing by the environment. In comparison with other feral horse populations in Australia and America there may be less pressure on the natural selection of the foot of the Kaimanawa horses by the forgiving environment of the Kaimanawa Ranges. Contrary to popular belief, the feral horse foot type should not be used as an ideal model for the domestic horse foot.

A tensor-based morphometry study of genetic influences on brain structure using a new fluid registration method

We incorporated a new Riemannian fluid registration algorithm into a general MRI analysis method called tensor-based morphometry to map the heritability of brain morphology in MR images from 23 monozygotic and 23 dizygotic twin pairs. All 92 3D scans were fluidly registered to a common template. Voxelwise Jacobian determinants were computed from the deformation fields to assess local volumetric differences across subjects. Heritability maps were computed from the intraclass correlations and their significance was assessed using voxelwise permutation tests. Lobar volume heritability was also studied using the ACE genetic model. The performance of this Riemannian algorithm was compared to a more standard fluid registration algorithm: 3D maps from both registration techniques displayed similar heritability patterns throughout the brain. Power improvements were quantified by comparing the cumulative distribution functions of the p-values generated from both competing methods. The Riemannian algorithm outperformed the standard fluid registration.

Mapping the regional influence of genetics on brain structure variability - A Tensor-Based Morphometry study

Genetic and environmental factors influence brain structure and function profoundly. The search for heritable anatomical features and their influencing genes would be accelerated with detailed 3D maps showing the degree to which brain morphometry is genetically determined. As part of an MRI study that will scan 1150 twins, we applied Tensor-Based Morphometry to compute morphometric differences in 23 pairs of identical twins and 23 pairs of same-sex fraternal twins (mean age: 23.8 ± 1.8 SD years). All 92 twins' 3D brain MRI scans were nonlinearly registered to a common space using a Riemannian fluid-based warping approach to compute volumetric differences across subjects. A multi-template method was used to improve volume quantification. Vector fields driving each subject's anatomy onto the common template were analyzed to create maps of local volumetric excesses and deficits relative to the standard template. Using a new structural equation modeling method, we computed the voxelwise proportion of variance in volumes attributable to additive (A) or dominant (D) genetic factors versus shared environmental (C) or unique environmental factors (E). The method was also applied to various anatomical regions of interest (ROIs). As hypothesized, the overall volumes of the brain, basal ganglia, thalamus, and each lobe were under strong genetic control; local white matter volumes were mostly controlled by common environment. After adjusting for individual differences in overall brain scale, genetic influences were still relatively high in the corpus callosum and in early-maturing brain regions such as the occipital lobes, while environmental influences were greater in frontal brain regions that have a more protracted maturational time-course.

Muscle morphometry of the individual hamstring muscles in semi-elite AFL Players: Preliminary findings from a longitudinal study

Hamstring strains in the Australian Football League (AFL) have a high incidence (15%) and recurrence rate (34%) with lateral hamstring injuries most common (83%). Retrospective studies have found significant muscle volume asymmetries ≤23 months post hamstring injury; however examination of the association between hamstring strains and muscle asymmetry has not been investigated prospectively. This study presents baseline data from a longitudinal study focusing on individual hamstring morphometry in uninjured and injured semi-elite AFL players.

Biology and morphometry study of Drepane punctata (Cuv and Val) at juvenile stage of Bombay coast

The metric and meristic characters of Drepane punctata from Versova Fish Landing Centre of Bombay have been studied. The meristic characters showed considerable variations. The number of dorsal fin rays were relatively stable characters. Statistical interpretation of metric data indicated that there is a direct relationship between the preanal, predorsal in relation to total length and eye-diameter in relation to head length.

Morphometry, length-weight relationship and food and feeding habits of Otolithoides biauritus (Cantor, 1850) of Bombay waters

Thirteen morphometric and seven meristic characters, length-weight relationship and food and feeding habits of Otolithoides biauritus of Bombay coast (Maharashtra, India) were studied. Compared morphometric characters revealed positive allometric growth and high correlation ("r" ranging 0.898 - 0.996) between each other. Meristic characters were observed to be B sub(vii), D sub(1) 8-10, D sub(2) 27-31, P 17-20, V 5-7 and 7-10. Number of gill rackers on the first left gill arch ranged from 15 to 19. Length-weight relationship for both sexes together worked out to be W = 0.026, L super(2.646). The species is a predator, feeding mainly on motile Acetes, small fish and Loligo in order of preference.

Morphometry and population dynamics of Sepia aculeata, (Orbigny - 1848) along the Bombay coast

Cephalopods gained importance in the fishing industry when they emerged as one of the leading sea food products exclusively for international market in the mid seventies. Cephalopods fishery in India is still in an infant stage with vast scope for exploitation. The present work on the cephalopods fishery along the Bombay coast is an effort to quantify the resource potential of Sepia acculeata. The morphometry, growth parameters, mortality (total, natural and fishing) rates, the yield per recruit and standing stock were studied.

Limnological studies of a freshwater tropical impoundment : Powai Lake. 1: Morphometry and physical features

Powai Lake, an impoundment, came into existence in 1891 when the riverlet Dhanisar was dammed to conserve rainwater for drinking purpose. However, the water was found to be unpotable and the lake was leased out to the Angling Association, Bombay, exclusively for angling and sports. The lake is located about 27 km in the northeast of Bombay city at a height of 55m above MSL. It is rainfed with an average rainfall of 2,400 mm. The maximum waterspread area is 220 ha with a maximum capacity of 8.11 million m super(3) in the peak monsoon period when the water overflows the dam. There is no drawdown from the lake. Fluctuation in the water level is mainly due to evaporation and percolation. Transparency is low mainly due to suspended organic particles. There is hardly any difference in the water temperatures of surface and bottom, hence the annual heat budget is low at 2,818 cal m super(-2).

Fecundity, morphometry post embryonic growth and development of Caridina simoni Bouvier (Decapoda: Atyidae)

The fecundity, morphometry and the post embryonic development of Caridina simoni which is the commonest atyid shrimp in Sri Lanka were studied. The fecundity values ranged from 12-55. There was a linear relationship between the logarithmic values of fecundity and body length and the same relationship was obtained for body length and weight. It was seen that the developmental period of this species was less than six days and during development it passed through six zoeal stages.

Morphometry and length-weight relationship of Coilia dussumieri, Valenciennes, 1848 from Mumbai waters

Coilia dussumieri Valenciennes, 1848 a component of 'dol' net fishery forms an important pelagic resource along northwest coast of India. The present communication deals with morphometry and length-weight relationship of this species along Mumbai coast. Morphometric study showed a positive correlation among the compared characters. The length-weight relationship for the species from Mumbai coast was found to be W=0.017L super(2.4223).

Morphometry, length-weight relationship and biology of Sepia aculeata (d'Orbigny, 1848) from Mumbai coast, India

Seventeen morphometric characters of Sepia aculeata of Mumbai coast have been studied and the relationships of morphometric characters with dorsal mantle length (DML) were established. The characters compared showed a fair to high degree of correlation ('r' 0.63-0.99). Number of arm suckers and shell rings were related with DML. The shell rings also showed high degree of correlation with DML ('r' 0.79-0.95). However, the relationship between arm suckers and DML was not so good ('r' 0.1-0.4). The length-weight relationship is described as W=0.1821336 L sub(2.801102). Food and feeding analysis confirm the carnivorous feeding behaviour of the species. Mature females found in all months indicate that it has prolonged spawning season with two peaks, september and march-april. Absolute fecundity ranged from 214 to 4143 eggs.

Studies on morphometry and hydrology of Gandhisagar Reservoir with special reference to its fisheries

Gandhisagar, the second largest reservoir of India is located in Mandsaur district of Madhya Pradesh at latitude 24°44'N and longitude 75°33'E at an altitude of 403.56m MSL in orientation from NE to SE. It has an extensive water spread area of 66000 ha at full reservoir level with a maximum and mean depth of 49.52 and 11.73 m respectively. The maximum length and width of the reservoir are 112 and 16km having a total shore line of 442km. Details of catchment area, bathymetry, standard hydrological data giving water level relation of the basin to water spread area, volume and fish production and the bottom topographical details of 11 experimental fishing stations and 6 fish landing centres are discussed.