A new species of Raorchestes (Amphibia: Anura: Rhacophoridae) from mid-elevation evergreen forests of the southern Western Ghats, India

A new species of the shrub frog genus Raorchestes Biju, Souche, Dubois, Dutta and Bossuyt is described as Raorchestes kakachi sp. nov. from Agastyamalai hill region in the southern Western Ghats, India. The small sized Raorchestes (male: 24.7–25.8 mm, n = 3 and female: 24.3–34.1 mm, n = 3) is distinguished from all other known congeners by the following suite of characters. Snout oval in dorsal view; tympanum indistinct; head wider than long; moderate webbing in feet; colour on dorsum varying from ivory to brown, blotches of dark brown on flanks, brown mottling on throat reducing towards vent; inner and outer surface of thigh, inner surface of shank and inner surface of tarsus with a distinct dark brown horizontal band which extends upto first three toes on upper surface. A detailed description, advertisement call features, ecology, natural history notes and comparison with closely related species are provided for the new species.

A new species of Duttaphrynus (Anura : Bufonidae) from Northeast India

A new species of montane toad Duttaphrynus is described from Nagaland state of Northeast India. The new species is diagnosable based on following combination of characters: absence of preorbital, postorbital and orbitotympanic ridges, elongated and broad parotid gland, first finger longer than second and presence of a mid-dorsal line. The tympanum is hidden under a skin fold (in male) or absent (in female). The species is compared with its congers from India and Indo-China. We propose to consider Duttaphrynus wokhaensis as junior synonym of Duttaphrynus melanostictus.

Mud-packing frog: A novel breeding behaviour and parental care in a stream dwelling new species of Nyctibatrachus (Amphibia, Anura, Nyctibatrachidae)

Reproductive modes are diverse and unique in anurans. Selective pressures of evolution, ecology and environment are attributed to such diverse reproductive modes. Globally forty different reproductive modes in anurans have been described to date. The genus Nyctibatrachus has been recently revised and belongs to an ancient lineage of frog families in the Western Ghats of India. Species of this genus are known to exhibit mountain associated clade endemism and novel breeding behaviours. The purpose of this study is to present unique reproductive behaviour, oviposition and parental care in a new species Nyctibatrachus kumbara sp. nov. which is described in the paper. Nyctibatrachus kumbara sp. nov. is a medium sized stream dwelling frog. It is distinct from the congeners based on a suite of morphological characters and substantially divergent in DNA sequences of the mitochondrial 16S rRNA gene. Males exhibit parental care by mud packing the egg clutch. Such parental care has so far not been described from any other frog species worldwide. Besides this, we emphasize that three co-occurring congeneric species of Nyctibatrachus, namely N. jog, N. kempholeyensis and Nyctibatrachus kumbara sp. nov. from the study site differ in breeding behaviour, which could represent a case of reproductive character displacement. These three species are distinct in their size, call pattern, reproductive behaviour, maximum number of eggs in a clutch, oviposition and parental care, which was evident from the statistical analysis. The study throws light on the reproductive behaviour of Nyctibatrachus kumbara sp. nov. and associated species to understand the evolution and adaptation of reproductive modes of anurans in general, and Nyctibatrachus in particular from the Western Ghats.

Lineage delimitation and description of nine new species of bush frogs (Anura: Raorchestes, Rhacophoridae) from the Western Ghats Escarpment

Bush frogs of the genus Raorchestes are distributed mainly in the Western Ghats Escarpment of Peninsular India. The inventory of species in this genus is incomplete and there is ambiguity in the systematic status of species recognized by morphological criteria. To address the dual problem of taxon sampling and systematic uncertainty in bush frogs, we used a large-scale spatial sampling design, explicitly incorporating the geographic and ecological heterogeneity of the Western Ghats. We then used a hierarchical multi-criteria approach by combining mitochondrial phylogeny, genetic distance, geographic range, morphology and advertisement call to delimit bush frog lineages. Our analyses revealed the existence of a large number of new lineages with varying levels of genetic divergence. Here, we provide diagnoses and descriptions for nine lineages that exhibit divergence across multiple axes. The discovery of new lineages that exhibit high divergence across wide ranges of elevation and across the major massifs highlights the large gaps in historical sampling. These discoveries underscore the significance of addressing inadequate knowledge of species distribution, namely the ``Wallacean shortfall'', in addressing the problem of taxon sampling and unknown diversity in tropical hotspots. A biogeographically informed sampling and analytical approach was critical in detecting and delineating lineages in a consistent manner across the genus. Through increased taxon sampling, we were also able to discern a number of well-supported sub-clades that were either unresolved or absent in earlier phylogenetic reconstructions and identify a number of shallow divergent lineages which require further examination for assessment of their taxonomic status.

Systematic status of Fejervarya ((Amphibia, Anura, Dicroglossidae) from South and SE Asia with the description of a new species from the Western Ghats of Peninsular India

We carried out a large-scale phylogenetic analysis of fejervaryan (dicroglossid frogs with `Fejervaryan lines' on the ventral side of the body) frogs, distributed in South and SE Asia, using published and newly generated sequences of unidentified individuals from the northern Western Ghats. The results corroborate the presence of a larger fejervaryan clade with a sister relationship to a clade composed of Sphaerotheca. Two sister clades could be discerned within the lager fejervaryan clade. The unidentified individuals formed a monophyletic group and showed a strong support for a sister relationship with Minervarya sahyadris. The species was found to be highly divergent (16S rRNA-4% and tyr-1%) from its sister lineage Minervarya sahyadris, and the clade composed of these two lineages were found to be deeply nested within the larger clade of Fejervarya. Based on this, the genus Minervarya Dubois, Ohler and Biju, 2001 is synonymized under the genus Fejervarya Bolkay, 1915. The unidentified lineage is recognized, based on phylogenetic position, genetic divergence and morphological divergence, as a distinct species and named here as Fejervarya gomantaki sp. nov. The presence of rictal glands was observed to be a synapomorphic character shared by the nested clade members, Fejervarya sahyadris and Fejervarya gomantaki sp. nov. Based on the presence of rictal gland and small size, Minervarya chilapata, a species from a lowland region in the Eastern Himalayas, is synonymized under Fejervarya and evidence for morphological separation from the new species, Fejervarya gomantaki sp. nov. is provided. For the fejervaryan frogs, currently three generic names (Frost, 2015) are available for the two phylogenetic subclades; the genus Fejervarya Bolkay, 1915 for the species of fejervaryan frogs having distribution in the South East Asia; the genus Zakerana Howlader, 2011 for the species of fejervaryan frogs having distribution in the South Asia and the genus Minervarya Dubois, Ohler and Biju, 2001 nested within the `Zakerana clade'. In the phylogenetic analysis Minervarya sahyadris, the new species described herein as Fejervarya gomantaki sp. nov. are nested within the `Zakerana clade', if the `Zakerana clade' for the fejervaryan frogs having distribution in the South Asia is provided a generic status the nomen `Minervarya' should be considered as per the principle of priority of the ICZN Code. Taking into consideration the overlapping distribution ranges of members of the sister clades within the larger fejervaryan clade and the absence of distinct morphological characteristics, we also synonymize the genus Zakerana Howlader, 2011, a name assigned to one of the sister clades with members predominantly distributed in South Asia, under the genus Fejervarya Bolkay, 1915. We discuss the need for additional sampling to identify additional taxa and determine the geographical ranges of the members of the sister clades within Fejervarya to resolve taxonomy within this group.

A new genus and species of arboreal toad with phytotelmonous larvae, from the Andaman Islands, India (Lissamphibia, Anura, Bufonidae)

A new bufonid amphibian, belonging to a new monotypic genus, is described from the Andaman Islands, in the Bay of Bengal, Republic of India, based on unique external morphological and skeletal characters which are compared with those of known Oriental and other relevant bufonid genera. Blythophryne gen. n. is distinguished from other bufonid genera by its small adult size (mean SVL 24.02 mm), the presence of six presacral vertebrae, an absence of coccygeal expansions, presence of an elongated pair of parotoid glands, expanded discs at digit tips and phytotelmonous tadpoles that lack oral denticles. The taxonomic and phylogenetic position of the new taxon (that we named as Blythophryne beryet gen. et sp. n.) was ascertained by comparing its 12S and 16S partial genes with those of Oriental and other relevant bufonid lineages. Resulting molecular phylogeny supports the erection of a novel monotypic genus for this lineage from the Andaman Islands of India.

Microhyla laterite sp nov., A New Species of Microhyla Tschudi, 1838 (Amphibia: Anura: Microhylidae) from a Laterite Rock Formation in South West India

In recent times, several new species of amphibians have been described from India. Many of these discoveries are from biodiversity hotspots or from within protected areas. We undertook amphibian surveys in human dominated landscapes outside of protected areas in south western region of India between years 2013-2015. We encountered a new species of Microhyla which is described here as Microhyla laterite sp. nov. It was delimited using molecular, morphometric and bioacoustics comparisons. Microhyla laterite sp. nov. appears to be restricted to areas of the West coast of India dominated by laterite rock formations. The laterite rock formations date as far back as the Cretaceous-Tertiary boundary and are considered to be wastelands in-spite of their intriguing geological history. We identify knowledge gaps in our understanding of the genus Microhyla from the Indian subcontinent and suggest ways to bridge them.

Variação sazonal nos parâmetros da comunidade de anuros de folhiço (Amphibia; Anura) da Reserva Natural Salto Morato, sul do Brasil

Neste estudo nós fornecemos os primeiros dados acerca dos parâmetros da comunidade de anuros de folhiço de uma floresta no estado do Paraná, sul do Brasil, incluindo informações sobre riqueza de espécies, densidades específicas e biomassa. Nosso estudo foi realizado na Reserva Natural Salto Morato entre julho de 2009 e abril de 2010. Para amostrar a comunidade de anuros de folhiço usamos 40 parcelas de 4 x 4 m em cada estação do ano (inverno, primavera, verão e outono), totalizando 2.560 m2 de chão de floresta amostrados. Nós amostramos um total de 96 anuros habitando o chão da floresta, pertencentes a sete espécies: Brachycephalus hermogenesi, Ischnocnema guentheri, Haddadus binotatus, Leptodactylus gr. marmoratus, Physalaemus spiniger, Proceratophrys boiei e Rhinella abei. A densidade total de anuros vivendo no chão da floresta foi de 3,73 ind/100m2, sendo I. guentheri (1,37 ind/100m2) a espécie mais numerosa e R. abei (0,19 ind/100m2), a mais rara. A estimativa da biomassa total na comunidade de anuros de folhiço foi de 3,290g. A temperatura foi um fator ambiental significativo para a abundância de anuros de folhiço, enquanto a umidade não foi importante na estruturação da comunidade na área estudada. A abundância, riqueza e densidade variaram consistentemente entre as quatro estações do ano amostradas, com os maiores valores ocorrendo nos meses mais quentes da primavera e verão. Esse estudo aumenta a distribuição geográfica de Brachycephalus hermogenesi.

A ecologia em miniatura: o menor tetrápodo do Brasil, Brachycephalus didactylus (Izecksohn, 1971) (Anura: Brachycephalidae) em uma área de Mata Atlântica no Espírito Santo, Sudeste do Brasil

O processo de miniaturização em anuros pode ter implicações ecológicas como, por exemplo, a redução no tamanho da ninhada produzida pelas fêmeas, o aumento do tamanho relativo dos ovos e o desenvolvimento direto. O consequente reduzido tamanho da boca tende também a constituir um fator limitante no consumo de presas por estes pequenos anuros, tornando acessível ao consumo apenas uma gama restrita de presas diminutas. Assim, estudamos parâmetros da ecologia de uma população do anuro Brachycephalus didactylus, em uma área de Mata Atlântica no sul do Espírito Santo, objetivando ampliar o conhecimento sobre tais parâmetros que compreenderam o dimorfismo sexual, algumas características da reprodução, a dieta e a relação com a disponibilidade de atrópodos no folhiço e uso do microhabitat. A amostragem dos dados ocorreu durante um ano, nas estações seca e chuvosa. Brachycephalus didactylus possuiu dimorfismo sexual, com fêmeas sendo maiores do que os machos. O maior tamanho atingido pelas fêmeas provavelmente resulta da seleção intrassexual atuando nas fêmeas para favorecer um maior investimento na massa dos ovos, já que a espécie possui um tamanho de ninhada consideravelmente reduzido (um a dois ovos). A dieta de B. didactylus foi composta por um espectro relativamente amplo de presas (17 itens), tendo elevadas proporções de pequenas presas como Acari e Collembola. O consumo de Formicidae (formigas) foi evitado por B. didactylus, apesar de essa presa ser a mais abundante no folhiço, o que categorizou o anuro como um "especialista em não comer formigas" ("non-ant specialist", sensu Toft 1980a). O reduzido tamanho da boca nas fêmeas de B. didactylus limitou o tamanho máximo de presas passíveis de serem ingeridas pelo anuro e restringindo-o ao consumo de presas pequenas, com maiores indivíduos consumindo um número maior de presas. Por fim, B. didactylus apresentou uma utilização essencialmente horizontal do hábitat, sendo mais frequentemente encontrado sobre o folhiço no chão da mata.

Aspectos da dieta, atividade, uso do hábitat e esforço reprodutivo de Hylodes nasus (Anura: Hylodidae) no Parque Nacional da Tijuca, Rio de Janeiro, RJ

Em uma das maiores florestas urbanas do mundo, o Parque Nacional da Tijuca no Rio de Janeiro, se situa uma espécie do gênero Hylodes: Hylodes nasus. Sobre esta espécie existem poucos estudos, os principais relatam sobre seu comportamento territorialista, suas vocalizações e sobre seu giríno. Neste trabalho, nós estudamos como se dá a atividade, o uso do hábitat, o esforço reprodutivo e a dieta de H. nasus. Esta espécie é endêmica do Maciço da Tijuca e está restrita a riachos, o qual tem se provado ser bastante relacionado ao seu modo de reprodução. Os dados revelaram que a espécie tem uma atividade essencialmente diurna que está muita ligada ao fotoperíodo e que essa atividade tem uma tendência a diminuição no período do meio do dia. Alguns trabalhos tem atribuído a diminuição da atividade de outras espécies à redução da intensidade luminosa alcançando seus sítios de vocalização, devido à posição do sol. A espécie, quando ativa, frequentemente permanece sobre pedras e perto de quedas dágua, que parecem ter um papel importante na sua atividade de vocalização. Verificamos uma mudança no uso dos micro-habitats entre o período diurno e o período noturno. Quanto à dieta os dados indicaram que esta é uma espécie que se alimenta predominantemente de um pequeno grupo de insetos (Diptera, Formicidae, Coleoptera e Hymenoptera). Ainda assim foi encontrado um grande espectro de presas presentes nos seus estômagos, principalmente de presas abundantes em riachos da Mata Atlântica. Tal fato pode indicar um comportamento mais oportunista e generalista por parte da espécie. O esforço reprodutivo empregado pelas fêmeas da espécie tendeu a ser maior no número de ovócitos do que no tamanho destes quando comparamos estes parâmetros às outras espécies de Hylodes. O tamanho e massa das fêmeas também tiveram uma relação positiva com o número respectivo de ovócitos encontrados nelas

The mitochondrial genome organization of the rice frog, Fejervarya limnocharis (Amphibia : Anura): a new gene order in the vertebrate mtDNA

The mitochondrial DNA of the rice frog, Fejervarya limnocharis (Amphibia, Anura), was obtained using long-and-accurate polymerase chain reaction (LA-PCR) combining with subcloning method. The complete nucleotide sequence (17,717 bp) of mitochondrial genome was determined subsequently. This mitochondrial genome is characterized by four distinctive features: the translocation of ND5 gene, a cluster of rearranged tRNA genes (tRNA(Thr), tRNA(Pro), tRNA(Leu) ((CUN))) a tandem duplication of tRNA(Mer) gene, and eight large 89-bp tandem repeats in the control region, as well as three short noncoding regions containing two repeated motifs existing in the gene cluster of ND5/tRNA(Thr)/tRNA(Pro)/tRNA(Leu)/tRNA(Phe). The tandem duplication of gene regions followed by deletions of supernumerary genes can be invoked to explain the shuffling of tRNAM(Met) and a cluster of tRNA and ND5 genes, as observed in this study. Both ND5 gene translocation and tandem duplication of tRNA(Met) were first observed in the vertebrate mitochondrial genomes. (c) 2004 Elsevier B.V. All rights reserved.

Paraphyly of Chinese Amolops (Anura, Ranidae) and phylogenetic position of the rare Chinese frog, Amolops tormotus

In order to evaluate the five species groups of Chinese Amolops based on morphological characteristics, and to clarify the phylogenetic position of the concave-eared torrent frog Amolops tormotus, we investigated the phylogeny of Amolops by maximum parsim