Expression of the extracellular domain of the human heat-stable enterotoxin receptor in Escherichia coli and generation of neutralizing antibodies

The entire extracellular domain of the human heat-stable enterotoxin (ST) receptor as well as a truncated N-terminal domain were cloned as glutathione S-transferase fusion proteins and expressed in Escherichia coli. The recombinant fusion proteins were purified from both the cytosol and the inclusion body fractions by selective detergent extraction followed by glutathione-agarose affinity chromatography. The purified protein, corresponding to the entire extracellular domain, bound the stable toxin peptide with an affinity comparable to that of the native receptor characterized from the human colonic T84 cell line. No binding was observed with the N-terminal truncated fragment of the receptor under similar conditions, Polyclonal antibodies were raised to the entire extracellular domain fusion protein as well as the truncated extracellular domain fusion protein, and the antibodies were purified by affinity chromatography. Addition of the purified antibodies to T84 cells inhibited ST binding and abolished ST-mediated cGMP production, indicating that critical epitopes involved in ligand interaction are present in the N-terminal fragment of the receptor, Purified antibodies recognized a single protein of M(r) 160,000 Da on Western blotting with T84 membranes, corresponding to a size of the native glycosylated receptor in T84 cells. These studies are the first report of the expression, purification, and characterization of any member of the guanylyl cyclase family of receptors in E. coli and show that binding of the toxin to the extracellular domain of the receptor is possible in the absence of any posttranslational modifications such as glycosylation. The recombinant fusion proteins as well as the antibodies that we have generated could serve as useful tools in the identification of critical residues of the extracellular domain involved in ligand interaction.

Genome-wide association analysis and differential expression analysis of resistance to Sclerotinia stem rot in Brassica napus

Brassica napus is one of the most important oil crops in the world, and stem rot caused by the fungus Sclerotinia sclerotiorum results in major losses in yield and quality. To elucidate resistance genes and pathogenesis-related genes, genome-wide association analysis of 347 accessions was performed using the Illumina 60K Brassica SNP (single nucleotide polymorphism) array. In addition, the detached stem inoculation assay was used to select five highly resistant (R) and susceptible (S) B. napus lines, 48 h postinoculation with S. sclerotiorum for transcriptome sequencing. We identified 17 significant associations for stem resistance on chromosomes A8 and C6, five of which were on A8 and 12 on C6. The SNPs identified on A8 were located in a 409-kb haplotype block, and those on C6 were consistent with previous QTL mapping efforts. Transcriptome analysis suggested that S. sclerotiorum infection activates the immune system, sulphur metabolism, especially glutathione (GSH) and glucosinolates in both R and S genotypes. Genes found to be specific to the R genotype related to the jasmonic acid pathway, lignin biosynthesis, defence response, signal transduction and encoding transcription factors. Twenty-four genes were identified in both the SNP-trait association and transcriptome sequencing analyses, including a tau class glutathione S-transferase (GSTU) gene cluster. This study provides useful insight into the molecular mechanisms underlying the plant's response to S. sclerotiorum.

Recombinant antigen-based avidin-biotin microtiter enzyme-linked immunosorbent assay for serodiagnosis of invasive amebiasis

An immunoscreening approach was used to isolate a strongly positive cDNA clone from an Entamoeba histolytica HK-9 cDNA expression library in the phage vector lambda ZAP-II. The 1.85-kb cDNA insert was found to be truncated and encoded the cysteine-rich, immunodominant domain of the antigenic 170-kDa subunit of the amebal galactose N-acetylgalactosamine binding lectin. This domain was expressed as a glutathione S-transferase fusion protein in Escherichia coli. Inclusion bodies of the recombinant protein were solubilized with Sarkosyl, and the protein was enriched from the crude bacterial extract by thiol-affinity chromatography. The recombinant protein was used to develop a rapid, sensitive, and specific avidin-biotin microtiter enzyme-linked immunosorbent assay (ELISA) for invasive amebiasis. Sera from 38 individuals suffering from invasive amebiasis, 12 individuals with noninvasive amebiasis, 44 individuals with other infections, and 27 healthy subjects were screened by the recombinant antigen-based ELISA. The sensitivity and specificity of the assay were 90.4 and 94.3%, respectively, which correlated well with those of an ELISA developed with crude amebal antigen (r = 0.94; P < 0.0001), as well as with those of a commercially available serodiagnostic ELISA (r = 0.92; P < 0.0001). Thus, the bacterially expressed recombinant lectin can replace the crude amebal extract as an antigen in the serodiagnosis of invasive amebiasis by using avidin-biotin microtiter ELISA.

Neuroprotective activity of Wedelia calendulacea on cerebral ischemia/reperfusion induced oxidative stress in rats

Objective: This study was undertaken to evaluate the neuroprotective activity of Wedelia calendulacea against cerebral ischemia/reperfusion induced oxidative stress in the rats. Materials and Methods: The global cerebral ischemia was induced in male albino Wistar rats by occluding the bilateral carotid arteries for 30 min followed by 1 h and 4 h reperfusion. At various times of reperfusion, the histopathological changes and the levels of malondialdehyde (MDA), glutathione peroxidase (GPx), glutathione reductase (GR), glutathione-s-transferase (GST), and hydrogen peroxide (H(2)O(2)) activity and brain water content were measured. Results: The ischemic changes were preceded by increase in concentration of MDA, hydrogen peroxide and followed by decreased GPx, GR, and GST activity. Treatment with W. calendulacea significantly attenuated ischemia-induced oxidative stress. W. calendulacea administration markedly reversed and restored to near normal level in the groups pre-treated with methanolic extract (250 and 500 mg/kg, given orally in single and double dose/day for 10 days) in dose-dependent way. Similarly, W. calendulacea reversed the brain water content in the ischemia reperfusion animals. The neurodegenaration also conformed by the histopathological changes in the cerebral-ischemic animals. Conclusion: The findings from the present investigation reveal that W. calendulacea protects neurons from global cerebral-ischemic injury in rat by attenuating oxidative stress.

MPTP activates ASK1-p38 MAPK signaling pathway through TNF-dependent Trx1 oxidation in parkinsonism mouse model

Activation of apoptosis signal regulating kinase 1 (ASK1)-p38 MAPK death signaling cascade is irn plicated in the death of dopaminergic neurons in substantia nigra in Parkinson's disease (PD). We investigated upstream activators of ASK1 using an MPTP mouse model of parkinsonism and assessed the temporal cascade of death signaling in ventral midbrain (VMB) and striatum (ST). MPTP selectively activated ASK1 and downstream 1)38 MAPK in a time dependent manner in VMB alone. This occurred through selective protein thiol oxidation of the redox-sensitive thiol disulfide oxidoreductase, thiorcdoxin (Trxl), resulting in release of its inhibitory association with ASK1, while glutathione-S-transferase ji 1 (GSTM1) remained in reduced form in association with ASK1. Levels of tumor necrosis factor (TNF), a known activator of ASK1, increased early after MPTP in VMB. Protein ovariation netvvork analysis (PCNA) using protein states as nodes revealed TNF to be an important node regulating the ASK1 signaling cascade. In confirmation, blocking MPTP-mecliated TNF signaling through intrathecal administration of TNFneutralizing antibody prevented Trxl oxidation and downstream ASK1-p38 MAPK activation. Averting an early increase in TNF, which leads to protein thiol oxidation resulting in activation of ASK1-p38 signaling, may be critical for neuroprotection in PD. Importantly, network analysis can help in understanding the cause/effect relationship within protein networks in complex disease states. (C) 2015 Published by Elsevier Inc.

Melatonina, isoenzimas de glutationa S-transferases e estresse oxidante em pacu Piaractus mesopotamicus (Holmberg, 1887)

O oxigênio é fundamental para os vertebrados. No entanto, variações dos níveis de oxigênio na água podem provocar estresse oxidante em peixes porque privação de oxigênio seguida de reoxigenação forma espécies reativas de oxigênio (ERO) em células. Níveis intracelulares de ERO aumentados favorecem que moléculas de proteínas, fosfolipídios e ácidos nucleicos sofram alterações, vindo a prejudicar muitas funções celulares. No Pantanal, habitat do pacu, o nível de oxigênio varia circadianamente na água das lagoas rasas que acabam isoladas dos rios na seca. O pacu evoluiu sob a pressão contínua da exposição aos efeitos prejudiciais das ERO causados pelos pulsos de inundação. A melatonina, uma indolamina produzida na glândula pineal, influencia os níveis de atividade de enzimas antioxidantes que reduzem ERO, além de ser capaz de doar elétrons ou captar radicais livres de forma não enzimática. Os níveis de melatonina no pacu são mais altos no verão e menores no inverno. Isoenzimas de glutationa S-transferases que conjugam o tripetídeo glutationa com o 4-hidroxinonenal, aldeído derivado da peroxidação de ácidos graxos por ERO, são importantes para evitar alteração funcional de proteínas por ligação do 4-hidroxinonenal à sua estrutura. Neste trabalho procuramos relação entre estresse oxidante, níveis de atividades de glutationa S-transferase e melatonina, para estabelecer se a melatonina ajudaria pacus a superar os efeitos deletérios das espécies reativas de oxigênio. Ensaiamos atividades de isoenzimas de glutationa S-transferases no citosol de fígado de pacus mantidos em normoxia, hipoxia, reoxigenação e hiperoxia no inverno e no verão. Medimos o efeito da melatonina in vitro e in vivo sobre as atividades de isoenzimas de glutationa S-transferase. Medimos os efeitos do estresse oxidante sobre a ligação do 4-hidroxinonenal com proteínas nos fígados de pacus tratados com melatonina. Somente as isoenzimas que conjugam 4-hidroxinonenal com glutationa mostraram menor atividade no inverno em relação ao verão; outras isoenzimas de glutationa S-transferases não alteram suas atividades sazonalmente. In vitro a melatonina não alterou a atividade de isoenzimas de glutationa S-transferase que conjugam o 4-hidroxinonenal, mas inibiu outras isoenzimas de glutationa S-transferase. In vivo a melatonina aumentou a atividade encontrada no inverno das isoenzimas que conjugam o 4-hidroxinonenal para os níveis do verão. A ligação de 4-hidroxinonenal com proteínas foi menor em pacus inoculados com melatonina. Nossos resultados mostram que a melatonina pode influenciar os efeitos de ERO em fígado de pacus. Ficou claro que a melatonina do plasma mantém os níveis de atividade conjugadora de 4-hidroxinonenal do fígado em pacus e que a baixa produção de melatonina no inverno não é adequada para a conjugação do 4-hidroxinonenal em fígado de pacus.

Biochemical biomarkers in samples processed by different methods in Environmental Specimen Banks

In the last decades the creation of new Environmental Specimen Banks (ESB) is increasing due to the necessity of knowing the effects of pollutants in both the environment and human populations. ESBs analyze and store samples in order to understand the effects of chemicals, emerging substances and the environmental changes in biota. For a correct analysis of the effect induced by these variables, there is a need to add biological endpoints, such as biomarkers, to the endpoints based on chemical approaches which have being used until now. It is essential to adapt ESB´s sampling strategies in order to enable scientists to apply new biological methods. The present study was performed to obtain biochemical endpoints from samples stored in the BBEBB (Biscay Bay Environmental Biospecimen Bank) of the Marine Station of Plentzia (PIE - UPV/EHU). The main objective of the present work was to study the variability caused in biochemical biomarkers by different processing methods in mussels (Mytilus galloprovincialis) from two localities (Plentzia and Arriluze) with different pollution history. It can be concluded that the selected biomarkers (glutathione S-transferase and acetylcholinesterase) can be accurately measured in samples stored for years in the ESBs. The results also allowed the discrimination of both sampling sites. However, in a further step, the threshold levels and baseline values should be characterized for a correct interpretation of the results in relation to the assessment of the ecosystem health status.

Influência do desequilíbrio redox e resposta inflamatória na fibrose pulmonar associada a estímulo inflamatório prévio

A fibrose pulmonar é uma doença pulmonar crônica caracterizada pelo acúmulo excessivo de matriz extracelular (MEC) e um remodelamento na arquitetura pulmonar. Embora já se saiba da participação do estresse oxidativo e da inflamação na fibrose de forma isolada, é importante observar como se comporta o estresse oxidativo na fibrose quando esta ocorre associada a uma doença de base. O presente estudo teve como objetivo investigar o perfil inflamatório e oxidativo na fibrose pulmonar associado ao enfisema pulmonar prévio. Camundongos C57BL/6 foram divididos em três grupos: grupo controle (n=5) que receberam salina intranasal (50 l) e foram sacrificados no 21 dia; grupo bleomicina (BLEO) (n=15) que receberam bleomicina intratraqueal (0.1 U/animal) no dia 0 e foram sacrificados nos 7 (n=5), 14 (n=5) e 21 (n=5) dias e grupo PPE (elastase) + BLEO (n=21) que receberam elastase (3U/animal) e após 14 dias receberam bleomicina e foram sacrificados nos 14(n=7), 21 (n=7), 28 (n=7) e 35 (n=7) dias. Foram realizadas análises histológicas através de H&E e picro-sirius; análises bioquímicas para superóxido dismutase (SOD), catalase (CAT), glutationa peroxidase (GPx) e glutationa-S-transferase (GST) e ELISA para Interleucina (IL)-1β e IL-6. A fibrose pulmonar ocorreu a partir do 14 dia (p<0.001) e o enfisema concomitante a fibrose pulmonar a partir do 28 dia (p<0.001) e um aumento de fibras colágenas no grupo BLEO 21(p<0.001) e PPE + BLEO 21(p<0.001). As enzimas antioxidantes CAT (p<0.01), SOD (p<0.01) e GPx (p<0.01) reduziram e a GST aumentou no grupo BLEO 21 dias (p<0.05). No grupo PPE + BLEO 21 dias houve redução das enzimas antioxidantes CAT, SOD, GPx (p<0.05) e GST. Os níveis de óxido foram altos nos grupos BLEO 21 dias (p<0.01) e PPE + BLEO 21 dias (p<0.01). A IL-1β mostrou-se elevada no grupo BLEO 7 dias quando comparado ao controle (p<0.001) e ao grupo PPE + BLEO 7 dias (p<0.01). Concluímos que a resposta inflamatória inibiu a ação do sistema antioxidante contribuindo para o agravamento da lesão. Isso sugere que terapias anti-inflamatórias podem contribuir tanto para redução da resposta inflamatória quanto de forma indireta no sistema antioxidante.

Enzimas antioxidantes em sangue de peixes expostos à hipoxia e hiperoxia

O oxigênio é importante não só por sua participação no metabolismo energético, mas também por sua conversão em derivados parcialmente reduzidos, as espécies reativas de oxigênio (ERO). ERO participam de funções importantes em diversas vias do metabolismo, entretanto, em concentrações desequilibradamente elevadas deflagram a peroxidação lipídica, processo deletério que forma aldeídos tóxicos, como o 4-hidroxi-2-nonenal (4-HNE). A manutenção de concentrações não deletérias das ERO é realizada por moléculas componentes do sistema antioxidante. Peixes podem ser expostos a grandes variações das concentrações de oxigênio, o que provoca ciclos oxidantes. A maioria dos estudos usa fígado e rim para avaliar estresse oxidante por meio de ensaios das atividades antioxidantes, o que requer o sacrifício dos animais. Contudo, o sangue sofre efeitos das ERO e avaliações no sangue podem permitir o estudo de antioxidantes no mesmo animal, sem a necessidade de sacrifício. Em consequência, foram nossos objetivos estabelecer uma técnica de cateterismo branquial em peixes, a padronização dos ensaios e a avaliação em sangue de componentes do sistema antioxidante de duas espécies de teleósteos em diferentes tensões de oxigênio. Pacus e tilápias foram avaliados em 6,0 mg de O2.L-1 e em hipoxia a 0,5 mg de O2.L-1 por 42 horas . Para os ensaios de hiperoxia os animais foram avaliados em 6,0 mg de O2.L-1, depois de 6 horas em 9,5 mg de O2.L-1 e depois de 30 horas de recuperação a 6,0 mg de O2.L-1. A utilização de materiais para o cateterismo de humanos permitiu a implantação de um acesso branquial. Infelizmente, houve formação de trombo após 24 horas. Mesmo assim, a observação de fluxo sanguíneo no interior da cânula e a sobrevida dos animais testados, confirmam a viabilidade da técnica. Verificamos em sangue uma maior atividade da enzima glutationa S-transferase (GST) sobre o 4-HNE em relação ao 1-cloro-2-dinitrobenzeno (CDNB). Isto reflete a importância de avaliações de atividade de enzimas, como a GST, sobre substratos endógenos. As respostas enzimáticas de tilápias mostraram-se mais sensíveis que as dos pacus quando comparadas em diferentes tensões de oxigênio.

无根萍生物学特性研究

无根萍属（Wolffia ）隶属于浮萍科天南星目，是世界上最小的被子植物。该属植物繁殖速度快;易于培养;结构简单，只具有一个雄蕊和一个雌蕊;自然状态下通常为克隆繁殖，遗传结构高度一致，具备特定研究目的模式植物的特点，正在或已经成为一些实验室研究光合作用、生物反应器、毒理学、生态修复和环境监测等的重要模式生物材料;同时还被作为建造航天生活仓和地外生命支撑系统的首选植物。该属植物蛋白含量高且氨基酸组分平衡，营养价值可与大豆相媲美。但该属植物一直是分类学界的疑难类群，不同的学者对该属的分类处理比较混乱;其次，对该属的生物地理研究也很不够，尤其是对国产类群的研究;另外，W. globosa 作为该属中国分布的物种，其生理学特性和形态结构发育还缺乏研究。为此，本文通过mat K 基因测序、RAPD 标记等手段，结合野外和室内的长期观测，对其分类和中国的地理分布以及生理学特性进行了研究。针对浮萍科植物作为水生植物，其对重金属和芳香烃衍生物的耐受逆境能力大小，和对淡水水体环境生态的指示作用。本文研究了W. globosa 具解毒功能的谷胱甘肽转硫酶的活性;最后，探索了从黄鳝（Monpterus albus Zuiew ）中分离纯化GSTs 的技术与方法并对maGST 的部分特性进行了研究。主要研究结果如下： 1. Wolffia 系统分类学研究 前人认为，Wolffia 柱头的颜色是重要的分组、分种检索性状。我们对其长期、活体、原位、实时跟踪观测结果表明，柱头颜色是Wolffia 个体发育上的变化过程，不是一个稳定性状，用作Wolffia subgroup 内组的划分特征和种的鉴别特征是不适合的。在此基础上我们重新修定了该属的分种检索表。利用形态分类学性状——气孔、长/宽、高/宽以及最大宽度在水面上还是水面下等性状，认为中国分布的类群应是W. globosa，但亦有W. neglecta 存在的证据。mat K 基因片段结果支持形态学的结论。通过广泛的野外采集，在我国北京、河北和吉林发现Wolffia 的新分布。 2. 中国Wolffia 居群遗传学研究 以RAPD 分子标记对广泛分布的居群遗传多样性研究表明，无根萍属植物主要以无性繁殖方式繁育，居群主要由单一克隆后代组成，如海河流域以及松花江流域居群;但一些居群亦兼有性繁殖方式，并具较高的遗传多样性，如武汉、海南居群。利用MVSP, Popgene 和Ntsys 等分析方法探讨了中国产Wolffia 居群遗传多样性和地理分布格局间关系。 3. W. globosa 的生理学研究 建立了较为完善的W. globosa 的无菌培养和保存体系。W. globosa 在逆境中，会形成休眠体;同时，发现不同居群甚至不同克隆系之间其抗逆性和生长速度存在着显著差异，差异最大的如海南文昌居群的生长速率，是长春居群的4.19 倍;不同的时间统计生长周期存在着不同结果，生长节律每天有两个生长高峰呈双“S”型;W. globosa 的耐受温度范围和pH 范围广;低浓度的IAA，GA，6-BA， EDDHA-Fe 以及EDTA 等物质具有促进W. globosa 生长的特性;但是，所有这些处理均没能促使W. globosa 从营养生长转入生殖生长。 4. W. globosa 的解剖学研究 W. globosa 通常是进行克隆繁殖，通过组织切片发现无性分枝子体还未伸出母株之前就已经完成分化，与此同时分枝子体中又分化出新的子体，分枝呈聚伞状，子体生长方向彼此相对;另外，生殖生长结构的分化也是在母体中完成的;生殖生长点与营养生长点不是同一生长点。 5. 浮萍科植物的毒理学研究 以重金属Cr3+和芳香烃衍生物CDNB 溶液处理Wolffia，Spirodela 和Lemna， 三种水生生物，结果表明Wolffia 比Spirodela， Lemna 对重金属和芳香烃衍生物有更强的抗逆能力，如在同等条件下对于Cr3+Wolffia 的半致死剂量800GB(≈ 80mg/L)，而Spirodela 和Lemna 则分别为10mg/L;20mg/L;表明W. globosa 是一个优良的生态环境修复植物。与此同时，研究了W. globosa 中具有解毒功能的GSTs 粗酶液活力在不同浓度的重金属离子（Cu2+和Cd2+）以及芳香烃衍生物（CDNB 和NBD-Cl）随处理时间的变化情况。 6. 从水生生物黄鳝Monpterus albus Zuiew 中分离纯化GSTs 的研究GSTs 活性的变化是环境监测的一个Biomarker，为此研究从M. albus 中分离 纯化GSTs 的技术与方法。经GSH 亲和层析纯化的酶活力为粗酶液的207 倍，进而鉴定了maGST 的部分特性。SDS-PAGE 电泳和MALDI-TOF/MS 表明MaGST 为同源二聚体，分子量约为52kDa，单亚基分子量约为26 kDa。maGST 酶动力学表明对CDNB 为13.07 ± 0.37 微摩尔每分钟每毫克蛋白;对NBD-Cl 为5.54 ± 微摩尔每分钟每毫克蛋白;对ECA、4-NPA 几乎没有活性。在GSH 底物饱和，CDNB 的Km 值和Vmax 分别为0.32 mM 和16.19 微摩尔每分钟每毫克蛋白;CDNB 底物饱和，GSH 的Km 值和Vmax 分别为0.44 mM 和28.83 微摩尔每分钟每毫克蛋白。maGST 的酶活性pH 值较宽，温度范围广：在pH7.0-7.5 具有最大速度，在pH6.5 和pH8.5 时分别具有65%和72%的酶活力;在45℃时具有最大活性，30℃和55℃时为最大活力的80%，60℃几乎完全丧失酶活力。

烟草FtsZ基因的表达特征分析及其对质体发生的影响

FtsZ (filamentation temperature-sensitive，fts)是广泛存在于原核生物和高等植物中的一种功能蛋白。它控制着原核细胞和质体的分裂过程。研究该基因的表达调控特征，为我们进一步认识原核细胞和质体分裂的分子机制及真核细胞的起源和进化等重要问题提供了新的思路。从烟草克隆FtsZ cDNA，构建了谷胱甘肽转移酶（GST, glutathione S-transferase，EC 2.5.1.18）与FtsZ融合蛋白的表达质粒，并将其导入到在异丙基-β-D-硫代半乳糖苷(IPTG)诱导下能高效表达的JM109大肠杆菌中。高表达的融合蛋白通过谷胱甘肽一琼脂糖(glutathione-agarose)亲和层析和SDS-聚丙烯酰胺凝胶电泳纯化后，用以免疫兔子制备抗血清。免疫印迹法表明烟草FtsZ基因表达具有明显的组织器官特征，在质体（叶绿体）分裂活跃部位表达强：幼嫩花瓣>幼叶>幼根>老叶>茎。黑暗处理l天对FtsZ表达似乎无影响，随黑暗培养时间延长，FtsZ蛋白表达逐渐降低，叶绿体转化成为数目众多（增加2-3倍）体积小的淡黄色或白色质体。该实验结果显示，光对植物FtsZ基因表达很可能无直接影响，FtsZ基因表达强弱是决定质体（叶绿体）分裂和细胞中质体（叶绿体）数目多少的主要原因之一。

羊草细胞差异表达基因分析与遗传转化方法研究

羊草（Leymus chinensis (Trin.) Tzvel），隶属禾本科赖草属，是欧亚大陆草原区东部重要建群种之一。羊草是牧草之王，是我国比较有优势的战略性生物资源，对我国北方畜牧业的发展以及生态环境的保育均具有重要意义。近年来，由于缺乏科学管理、过度放牧等不利影响，加之羊草本身固有的“三低”问题（即抽穗率低、结实率低、发芽率低）已对羊草生物多样性维持构成了严重的威胁，限制了我国人工草地建设和天然草地的改良及沙化治理的步伐。因此，如何通过细胞、分子生物学以及生物技术手段改良羊草、快速评价和创造新的种质;如何加快育种进程便成为当前亟待解决的问题。本文围绕这些问题开展了系统的研究并取得如下结果： 1. 建立了羊草离体培养再生体系，并研究了影响愈伤组织诱导和植株再生的因素，影响植株再生的主要因素为激素配比和基因型。将3～5mm的幼穗接种到含有2,4-D 0～5.0mg/L的N6基本培养基上，随着2,4-D浓度的变化，愈伤组织诱导率不同，最高诱导率为93.21%（基因型C6）、最低为33.35%（吉生1号）;愈伤组织在N6(大)＋B5(微)＋KT1.0mg/L+BA1.0mg/L的培养基上可以分化出芽，并在1/2MS培养基上生根。羊草基因型W4不同幼穗诱导的愈伤组织在继代培养过程中其生长、褐化死亡等方面存在着差异;在分化培养过程中，不同幼穗的愈伤组织最高分化率为9.24%，最低分化率为5.26%。 2. 对来自同一基因型不同幼穗的愈伤组织中差异表达的基因进行了研究。采用DDRT-PCR技术对其差异表达的基因进行了分离，通过银染技术显示差异片段。将得到的差异片段进行回收、克隆测序，得到两个差异片段序列，经过序列分析表明，其中一个片段是与水稻翻译延伸因子eEF-1基因高度同源;另一差异片段与水稻谷胱甘肽转移酶GST基因高度同源。 3. 建立了羊草遗传转化方法。在获得羊草离体培养再生体系的基础上，采用基因枪法对羊草两个基因型进行转抗除草剂基因（PAT）的研究。对分别来自基因型W4和C3的愈伤组织各1430和1850块进行转化。在附加1.0mg/L PPT的培养基上进行一系列的筛选培养，共获得了23株再生苗，经过生根筛选培养，得到5株抗性苗，3株来自基因型W4，2株来自基因型C3。对5株植株进行PCR和Southern 检测，得到2株阳性苗，均来自基因型W4，对阳性植株经过无性繁殖得到的无性系进行PCR检测及Basta耐受性鉴定，外源基因可以在其无性系稳定遗传并表达，无性系除对Basta具有抗性外，其表型特征与对照无明显区别。

水稻幼苗脱黄化过程以及灌浆期茎的蛋白质组学研究

水稻既是我国三大粮食作物之一，又是基因组学研究的模式材料，在生产实践和科学研究中都占有极其重要的地位。基因组学研究取得的巨大成就以前所未有的深度和广度推动了生命科学各个研究领域的飞速发展。水稻基因组的破译是水稻科学研究的重要里程碑，同时也宣告了功能基因组学时代的到来。蛋白质组学是研究细胞内全部蛋白质的动态表达及其相互关系的新兴学科，是功能基因组学研究的重要组成部分和战略制高点。 本论文采用高分辨率的蛋白质双向电泳分离技术和高通量的蛋白质质谱分析技术以及生物信息学等手段，开展水稻灌浆期茎蛋白质组表达模式和水稻幼苗脱黄化过程的比较蛋白质组学研究，探讨茎生长发育规律和水稻应答光信号相关蛋白质及其网络调控机制，是学科前沿与实际应用的有机结合，在科研和生产实践中都具有重要的意义。 首先，分别构建了灌浆期水稻顶端茎段和水稻黄化幼苗的蛋白质组表达谱。并对其中185个目的蛋白点进行了MALDI-TOF/MS分析和数据库检索鉴定。共有149个蛋白质得到了鉴定，蛋白质鉴定的成功率为80.5％。这些被鉴定的蛋白质分属118个基因的表达产物，根据它们功能可以分为13种不同的类别，其中绝大多数为能量产生和代谢以及抗性相关的蛋白质。 在水稻灌浆期顶端茎段表达的蛋白质中，与能量和物质代谢相关的蛋白质例如ATPase、磷酸丙糖异构酶，6－磷酸葡萄糖异构酶等占有很高比例，说明茎段组织中具有很强的代谢活动。与生长发育相关的蛋白质包括beta-tubulins、无机焦磷酸酶（inorganic pyrophosphatase）、液泡质子ATP酶（vacuolar proton-ATPase）以及UDP葡萄糖焦磷酸酶等的大量累积，显示出顶端茎段细胞分裂和生长迅速;同时，贮存多糖和结构多糖也在旺盛合成。G蛋白、GDP释放抑制因子等信号传导蛋白以及苯丙氨酸氨解酶、谷胱苷肽S转移酶（glutathione S-transferase，GST）、抗坏血酸过氧化酶（ascorbate peroxidase，APX）以及超氧化物歧化酶（superoxide dismutase，SOD）等抗性相关蛋白质在该时期丰度表达，表明在灌浆期水稻顶端茎段能够迅速感受并传递外界信号，从而使得其在遭受胁迫时能够立刻启动抗逆防御系统，最大限度地降低不利环境对种子发育的影响。 在黑暗中萌发和生长的水稻黄化幼苗随着光照时间（0~24小时）的延长，能通过双向电泳后检测到的蛋白质逐渐变少，24小时后趋于稳定，相当于正常光照条件下生长的水稻幼苗蛋白质组表达谱。进一步分析表明，在黄化苗中，分解代谢及能量产生相关的蛋白如丙糖磷酸异构酶、琥珀酰辅酶A连接酶、异戊酰辅酶A脱氢酶与ATPase等的表达量比较丰富;另外，还可能启动了脂肪酸的α氧化分解途径，以供黑暗中生长所需的物质和能量。当黄化幼苗光照后，与光合作用及物质合成相关的一些蛋白质表达量增加，而那些分解代谢相关酶类则有所下降。同时，鸟核苷酸结合蛋白β亚基类似蛋白、20S proteasome以及Bowman Birk trypsin inhibitor等信号传递及抗性相关蛋白随着光照时间的延长而减少，说明黑暗胁迫条件下水稻幼苗启动了相关的抗逆途径。叶绿素合成途径中的蛋白酶胆色素原脱氨基酶和金属鳌合酶在脱黄化过程中表达量有所下降，可能是因为叶绿素合成产物具有反馈抑制作用。 本研究首次利用蛋白质组学方法来解析水稻灌浆期茎蛋白质组表达模式和水稻黄化幼苗响应光因子的蛋白质组变化情况，鉴定了一些有价值的蛋白质，并得到了它们的表达特点和相关数据，为更好地理解水稻顶端茎秆的生长特点和功效、水稻应答黑暗胁迫和光形态建成以及光合作用机理等提供了分子证据。

Biogeochemical study of poly aromatic hydrocarbons (PAHs) and its physiological affection response in mudskipper (Boleophthalmus dussumieri) at coast of Khuzestan

Study on the biomarkers types to assess health status of marine ecosystems in environmental biomonitoring has an important value. Accordingly, accumulation of polycyclic aromatic hydrocarbons(PAHs) in sediment, water and tissues (liver and gill) of mudskipper(i.e. Boleophthalmus dussumieri) and some physiological responses like lysosomal membrane change performed on haemocytes, stability of red blood cell membrane and the Glutathione-S Transferase (GST) activity in the liver were measured in mudskipper. Samples were obtained from five sites along north western coast of the Persian Gulf (Khuzestan coast). Red blood cell membrane changes after different concentration of PAHs at different time was also studied to evaluate impact of PAHs compound on cell membrane. PAHs concentration was measured by HPLC method. The activity of GST enzyme was analysed by spectrophotometric method. Lysosomal membrane change was measured by NRR time method and stability of red blood cell membrane was evaluated by EOF test. Total PAH concentrations in the coastal sea water, the sediments, the liver and the gill tissues ranged between 0.80-18.34 μg/l, 113.50-3384.34 ng g-1 (dry weight), 3.99-46.64 ng g-1 dw and 3.11-17.76 ng g-1 dw, respectively. Highest PAHs pollution was found at Jafari while the lowest was detected at Bahrakan sampling sites. The lowest enzymatic activity was identified at Bahrakan (7.19 ± 1.541 nmol/mg protein/min), while the highest was recorded at Jafari (46.96 ± 7.877 nmol/mg protein/min). Comparative analysis of GST activity in the liver of mudskippers showed significant difference (p < 0.05) between the locations of Jafari and Bahrakan, and with other sites. Moreover, no significant difference was detected between the locations of Arvand, Zangi and Samayeli (p < 0.05). The mean RT was below 90 minutes in all sampling sites. Values of mean RT of the dye ranged from 34 (for the blood samples of mudskipper collected from Jafari site) to 78 minutes (for the blood samples of mudskipper collected from Bahrakan site). Spatial evaluation revealed the longest RT in fish from Bahrakan as compared with those from other sites. Preliminary results showed a significant difference (p < 0.05) among sampling sites except between Arvand and Zangi (p > 0.05). Osmotic fragility curves indicated that erythrocytes collected from mudskippers at Jafari were the most 009 fragile followed by Zangi> Arvand> Samayeli> and Bahrakan. The mean erythrocyte fragility was significantly higher at Jafari site (p < 0.05) when compared to other sites. Significant differences were found between the various sites (p < 0.05).The result indicated no significant differences between the control and treatments of mudskipper RBC exposed to field concentrations of PAHs (P>0.05). The results further indicated significant differences (P<0.05) between the control and treatments of mudskipper RBC exposed to acute. Potency Divisor concentrations. It is clear from the present result that chronic. Potency Divisor concentrations protect red cells against osmotic hemolysis. This study, however, showed that PAH concentrations in this region are not higher than the available standards. The findings showed that Lysosomal membrane destabilization, liver GST activities and fragility of red cell membrane are highly sensitive in the mudskipper, B. dussumieri. Thus, mudskipper perceived to be good sentinel organisms for PAH pollution monitoring. Sediment PAH concentrations were strongly correlated with biomarkers, indicating that PAH type pollutants were biologically available to fish. One of the possible risk assessment implications of this study is that biomarkers can be applied not only to characterize biological effects of pollution exposures, but also to determine the bioavailability of pollution in aquatic systems. The results also indicated that PAHs compound possess anti haemolytic property.

Microcystin-induced variations in transcription of GSTs in an omnivorous freshwater fish, goldfish

The glutathione S-transferases are important enzymes in the microcystin-induced detoxication processes. In this experiment, we cloned the full-length cDNA of alpha, pi and theta-class-like glutathione S-transferase genes from goldfish (Carassius auratus Q. Their derived amino acid sequences were clustered with other vertebrate alpha, pi and theta-class GSTs in a phylogenetic tree and the goldfish GST sequences have the highest similarity with those from common carp and zebrafish. Goldfish were i.p. injected with microcystins extract at two doses (50 and 200 mu g kg(-1) BW MC-LReq) and the relative changes of the mRNA abundance in liver, kidney and intestine were analyzed by real-time PCR. The transcription of GST alpha was suppressed in both liver and intestine, but induced in the kidney. Decreased transcription of GST theta was detected in liver, kidney and intestine in the low-dose group. The transcription of GST pi was suppressed in liver and intestine post-injection in both dose groups. These results suggested that the transcription of GST isoforms varied in different ways within an organ and among organs of goldfish exposed to MCs. (C) 2008 Elsevier B.V. All rights reserved.