Juniperus navicularis - a study of Portuguese population structure and fitness

Juniperus navicularis Gand. is a dioecious endemic conifer that constitutes the understory of seaside pine forests in Portugal, areas currently threatened by increasing urban expansion. The aim of this study is to assess the conservation status of previously known populations of this species located on its core area of distribution. The study was performed in south-west coast of Portugal. Three populations varying in size and pine density were analyzed. Number of individuals, population density, spatial distribution and individual characteristics of junipers were estimated. Female cone, seed characteristics and seed viability were also evaluated. Results suggest that J. navicularis populations are vulnerable because seminal recruitment is scarce, what may lead to a reduction of genetic variability due solely to vegetative propagation. This vulnerability seems to be strongly determined by climatic constraints toward increasing aridity. Ratio between male and female shrubs did not differ from 1:1 in any population. Deviations from 1:1 between mature and non-mature plants were found in all populations, denoting population ageing. Very low seed viability was observed. A major part of described Juniperus navicularis populations have disappeared through direct habitat loss to urban development, loss of fitness in drier and warmer locations and low seed viability. This study is the first to address J. navicularis conservation, and represents a valuable first step toward this species preservation.

Caracterização da diversidade parasitária em carníveros silvestres e implicações na conservação

Recolher dados para actualizar os conhecimento da diversidade parasitária dos mesocarnívoros mais abundantes nas regiões do sul de Portugal e relacionar a dispersão parasitária, a conservação e a saúde humana constituíram os principais objetivos deste estudo. Raposas (Vulpes vulpes), sacarrabos (Herpestes ichneumon), fuinhas (Martes foina), ginetes (Genetta genetta) e texugos (Meles meles) atropelados foram os carnívoros-hospedeiros em estudo. Um grupo de raposas caçadas foi também considerado parte da amostra. A informação geo-referenciada de todos os animais serviu para executar a análise espacial. Realizaram-se necrópsias meticulosas e procedeu­ se à recolha, identificação e preservação dos parasitas encontrados. Pela primeira vez em Portugal é registada a presença do parasita da gineta Ancytostoma martinezi. A correlação entre os factores humanos e ambientais e, a riqueza de espécies foi determinada estatisticamente. Densidade populacional, disponibilidade de égua, tipo de uso de solo e distância mínima às sedes de concelho não apresentaram uma relação estatisticamente significativa com a infecção parasitária das raposas. Os resultados obtidos relativamente à presença de parasitas zoonóticos nos animais silvestres em estudo fomentam o trabalho multidisciplinar entre a Biologia da Conservação e as ciências médicas. ABSTRACT; The aim of this study was to collect data in order to update the information related to the parasitic diversity of the predominant mesocarnívores in the southern regions of Portugal and to establish relationships between the parasite dispersal, conservation and human health. Road killed foxes (Vulpes vulpes), mongoose (Herpestes ichneumon), stone marten (Martes foina), common genets (Genetta genetta) and euroasian badgers (Meles meles) were the considered carnivore-hosts. A sample of hunted foxes was also regarded.AD the animals had geo-reference information, ultimately used for spatial analysis. Thorough necropsies were performed and macroparasites collected, identified and preserved. For the first time in Portugal Ancylostoma martinezi, a common genets parasite.is recorded. Statistical species richness and correlation between human and environmental factors were determined. Human population density, water drainage, soil use, minimum distance to head council cities and the infection status of foxes proved no significant statistical relation. Results obtained on zoonotic parasites present in wild animals enhance the necessity of multidisciplinary work between Biology conservation and medical sciences.

O comprimento descritivo mínimo na amostragem por transectos lineares

Apresenta·se um breve resumo histórico da evolução da amostragem por transectos lineares e desenvolve·se a sua teoria. Descrevemos a teoria de amostragem por transectos lineares, proposta por Buckland (1992), sendo apresentados os pontos mais relevantes, no que diz respeito à modelação da função de detecção. Apresentamos uma descrição do princípio CDM (Rissanen, 1978) e a sua aplicação à estimação de uma função densidade por um histograma (Kontkanen e Myllymãki, 2006), procedendo à aplicação de um exemplo prático, recorrendo a uma mistura de densidades. Procedemos à sua aplicação ao cálculo do estimador da probabilidade de detecção, no caso dos transectos lineares e desta forma estimar a densidade populacional de animais. Analisamos dois casos práticos, clássicos na amostragem por distâncias, comparando os resultados obtidos. De forma a avaliar a metodologia, simulámos vários conjuntos de observações, tendo como base o exemplo das estacas, recorrendo às funções de detecção semi-normal, taxa de risco, exponencial e uniforme com um cosseno. Os resultados foram obtidos com o programa DISTANCE (Thomas et al., in press) e um algoritmo escrito em linguagem C, cedido pelo Professor Doutor Petri Kontkanen (Departamento de Ciências da Computação, Universidade de Helsínquia). Foram desenvolvidos programas de forma a calcular intervalos de confiança recorrendo à técnica bootstrap (Efron, 1978). São discutidos os resultados finais e apresentadas sugestões de desenvolvimentos futuros. ABSTRACT; We present a brief historical note on the evolution of line transect sampling and its theoretical developments. We describe line transect sampling theory as proposed by Buckland (1992), and present the most relevant issues about modeling the detection function. We present a description of the CDM principle (Rissanen, 1978) and its application to histogram density estimation (Kontkanen and Myllymãki, 2006), with a practical example, using a mixture of densities. We proceed with the application and estimate probability of detection and animal population density in the context of line transect sampling. Two classical examples from the literature are analyzed and compared. ln order to evaluate the proposed methodology, we carry out a simulation study based on a wooden stakes example, and using as detection functions half normal, hazard rate, exponential and uniform with a cosine term. The results were obtained using program DISTANCE (Thomas et al., in press), and an algorithm written in C language, kindly offered by Professor Petri Kontkanen (Department of Computer Science, University of Helsinki). We develop some programs in order to estimate confidence intervals using the bootstrap technique (Efron, 1978). Finally, the results are presented and discussed with suggestions for future developments.

Bioactivity of Ruta graveolens and Satureja montana Essential Oils on Solanum tuberosum Hairy Roots and Solanum tuberosum Hairy Roots with Meloidogyne chitwoodi Co-cultures

As a nematotoxics screening biotechnological system, Solanum tuberosum hairy roots (StHR) and S. tuberosum hairy roots with Meloidogyne chitwoodi co-cultures (StHR/CRKN) were evaluated, with and without the addition of the essential oils (EOs) of Satureja montana and Ruta graveolens. EOs nematotoxic and phytotoxic effects were followed weekly by evaluating nematode population density in the co-cultures as well as growth and volatile profiles of both in vitro cultures types. Growth, measured by the dissimilation method and by fresh and dry weight determination, was inhibited after EO addition. Nematode population increased in control cultures, while in EO-added cultures numbers were kept stable. In addition to each of the EOs main components, and in vitro cultures constitutive volatiles, new volatiles were detected by gas chromatography and gas chromatography coupled to mass spectrometry in both culture types. StHR with CRKN co-cultures showed to be suitable for preliminary assessment of nematotoxic EOs.