SARS流行预测分析

表面上突如其来的SARS本质上却有极规律的内在发展演化机制,遵从初始缓慢增长、加速、减速和稳定终止四个阶段总体道路,自然和社会生活领域众多事件演化都符合这一规律,因而可以运用广义的Logistic生长模型进行描述.基于先期流行的广东SARS感染病例数据,以及尚未结束的北京、全国2003年SARS流行统计数据,借助于最优化分析技术,运用广义的Logistic生长模型对该事件演化特征参量进行了辨识;在此基础上,又借助于广义生长模型的特例--Gompertz函数进行了演化过程的预测,并与其他生长模型结果进行了比较.研究表明,生长模型模拟结果均与实际数据有很好的一致性,可以用来预测事件的发生演化过程,此次SARS事件堪称生长模型的经典实例.

抗SARS人源单链抗体H12的表达及复性

从SARS免疫抗体库获得的一株抗SARS-CoV人源单链抗体H12,亟待鉴定.为了快速制备大量具有生物活性的单链抗体H12,构建了pET28a-H12原核高表达载体,表达量占菌体总蛋白质30%以上.采用稀释复性和分子筛柱复性两种方法对包涵体蛋白进行复性与纯化,结果显示两种方法都能使得单链抗体复性.与稀释复性法相比,柱复性效果更好,其抗原结合活性是稀释复性法的1.51倍.柱复性后的单链抗体亲和力测定的解离常数Kd为73.5nmol/mL.为进一步研究单链抗体H12的功能奠定了基础.

Investigation of Interactions between Two Monoclonal Antibodies and SARS Virus with a Label-Free Protein Array

The investigation of interactions between two kinds of monoclonal antibodies and SARS virus with a label-free protein array technique were presented in this paper. The performance consists of three parts: a surface modification for ligand immobilization/surface, a protein array fabrication with an integrated microfluidic system for patterning, packaging and liquid handling, and a protein array reader of imaging ellipsometer. This revealed the technique could be used as an immunoassay for qualitative and quantitative detection as wen as kinetic analysis of biomolecule interaction.

SARS 及其它冠状病毒基因组组织结构和序列的初步比较分析

:严重急性呼吸综合症(Severe acute respiratory sydrome , SARS) 是一种全新的传染性疾病,它可能主 要是由冠状病毒的一个变种引起的. 本文比较SARS 及其它冠状病毒基因组组织结构和序列变异的情况,初步 的结果表明: ①尽管SARS 病毒与冠状病毒属的另外6 种病毒基因组序列上有较大的差异,但是它们具有较相 似的基因组组织结构; ②SARS 病毒与牛冠状病毒、鼠肝炎病毒具有较近的系统发育关系; ③虽然SARS 病毒扩 散的时间极短,但来自不同地区SARS 病毒的DNA 序列却存在一些突变,且这些突变又大多是改变氨基酸序 列的非同义突变.

Moderate mutation rate in the SARS coronavirus genome and its implications

Background: The outbreak of severe acute respiratory syndrome (SARS) caused a severe global epidemic in 2003 which led to hundreds of deaths and many thousands of hospitalizations. The virus causing SARS was identified as a novel coronavirus (SARS-CoV) an

Polymorphisms in the C-type lectin genes cluster in chromosome 19 and predisposition to severe acute respiratory syndrome coronavirus (SARS-CoV) infection

Background: Polymorphisms of CLEC4M have been associated with predisposition for infection by the severe acute respiratory syndrome coronavirus (SARS-CoV). DC-SIGNR, a C-type lectin encoded by CLEC4M, is a receptor for the virus. A variable number tandem

角突泥介虫(Ilyocypris angulata Sars)(介形亚纲)雄体的发现

本文报道了角突泥介虫(Ilyocypris angulata Sars)雄体的发现。对此雄体进行了详细的描述,论述了泥介虫属的生活方式,并讨论了介形类有三种生殖方式。

瘦尾细额溞Oxyurella tenuicaudis(Sars,1862)的若干生物学特征

瘦尾细额溞是一种出现数量极其稀少的枝角类。关于它的生物学特征尚未见诸文献。本文测量了一次采自云南永胜一池塘的本种300个两性个体的体长和怀卵量,就其幼体与成体的数量、体长与怀卵量、雄性以及性比等问题探讨了种群的生物学状况。 详细观察比较了这个种的重要分类特征——雌体后腹部,并描述了变异范围。对卵鞍和雄体也作了描述。

Phylogeny of SARS-CoV based on high-dimensional information geometry

We proposed a novel methodology, which firstly, extracting features from species' complete genome data, using k-tuple, followed by studying the evolutionary relationship between SARS-CoV and other coronavirus species using the method, called "High-dimensional information geometry". We also used the mothod, namely "caculating of Minimum Spanning Tree", to construct the Phyligenetic tree of the coronavirus. From construction of the unrooted phylogenetic tree, we found out that the evolution distance between SARS-CoV and other coronavirus species is comparatively far. The tree accurately rebuilt the three groups of other coronavirus. We also validated the assertion from other literatures that SARS-CoV is similar to the coronavirus species in Group I.

Determination of SARS-coronavirus by a microfluidic chip system

We have developed a new experimental system based on a microfluidic chip to determine severe acute respiratory syndrome coronavirus (SARS-Cov). The system includes a laser-induced fluorescence microfluidic chip analyzer, a glass microchip for both polymerase chain reaction (PCR) and capillary electrophoresis, a chip thermal cycler based on dual Peltier thermoelectric elements, a reverse transcription-polymerase chain reaction (RT-PCR) SARS diagnostic kit, and a DNA electrophoretic sizing kit. The system allows efficient cDNA amplification of SARS-CoV followed by electrophoretic sizing and detection on the same chip. To enhance the reliability of RT-PCR on SARS-CoV detection, duplex PCR was developed on the microchip. The assay was carried out on a home-made microfluidic chip system. The positive and the negative control were cDNA fragments of SARS-CoV and parainfluenza virus, respectively. The test results showed that 17 positive samples were obtained among 18 samples of nasopharyngeal swabs from clinically diagnosed SARS patients. However, 12 positive results from the same 18 samples were obtained by the conventional RT-PCR with agarose gel electrophoresis detection. The SARS virus species can be analyzed with high positive rate and rapidity on the microfluidic chip system.

SARS起源于污染对病毒进化的加速诱导

针对当前广为流传的SARS病毒“太空起源说”和“野生动物来源说”两种理论 ,本文根据污染进化生态学原理和SARS病毒发病传染特征 ,以有关实验结果为科学依据 ,阐述了SARS病毒的起源问题 ,指出 :我国当前环境日益严重的复合污染为SARS致病病毒的产生提供了适宜的外部生态条件和物质基础 ,SARS致病病毒可能起源于多个病毒的基因重组或融合 ,更可能是一种来自于感冒病毒进化而形成的超级感冒病毒 .可以预料 ,这一推断将为彻底解决SARS的病源提供有价值的理论指导