STRUCTURE OF THIAMINE BROMIDE SESQUIHYDRATE

3-[(4-Amino-2-methyl-5-pyrimidinyl)-methyl]-5-hydroxyethyl-4-methylthiazolium bromide sesquihydrate, C12H17N4OS+.Br-.1.5H2O, M(r) = 372.28, monoclinic, P2(1)/a, a = 11.676 (2), b = 24.819(7), c = 12.344 (3) angstrom, beta = 113.74(2)-degrees, V= 3274 (1) angstrom3 , Z = 8, D(x) = 1.51 g cm-3 (Mo Kalpha) = 0.71069 angstrom, mu = 26.2 cm-1, F(000) = 1528, T 293 K, R = 0.062 for 2720 observed reflections. Both the independent thiamine molecules A and B in the asymmetric unit adopt the common F conformation. A bromide anion is held by four neighbouring thiamine molecules through C(2)-H...Br hydrogen bonds and Br ... thiazolium-ring electrostatic interactions. Another bromide anion (or a water molecule) bridges the pyrimidine and thiazolium moieties of molecule A (or B) through a hydrogen bond with the amino group and an electrostatic interaction with the thiazolium ring.

A load simulation method of piezoelectric actuator in FEM for smart structures

More and more piezoelectric materials and structures have been used for structure control in aviation and aerospace industry. More efficient and convenient computation method for large complex structure with piezoelectric actuation devices is required. A load simulation method of piezoelectric actuation is presented in this paper. By this method, the freedom degree of finite element simulation is significantly reduced, the difficulty in defining in-plane voltage for multi-layers piezoelectric composite is overcome and the transfer computation between material main direction and the element main direction is simplified. The concept of simulation load is comprehensible and suitable for engineers of structure strength in shape and vibration control, thereby is valuable for promoting the application of piezoelectric material and structures in practical aviation and aerospace fields.

细胞色素b6f蛋白复合体的结构与功能色素的结构与功能及膜脂的作用

采用改进的的分离纯化方法从菠菜叶绿体中获得了纯度和活性、Chl a 和β-carotene含量较高的Cyt b6f制剂。利用吸收光谱、CD光谱和共振喇曼光谱对Cyt b6f蛋白复合体中的β-carotene分子的构型及构象进行了研究。结果表明，无论是结合在蛋白复合体上还是处于自由状态，该β-carotene都是一种特殊的9-顺式构型的分子;在蛋白复合体中，该9-顺式β-carotene存在于一种不对称的蛋白环境中，但从喇曼光谱中没有观察到构象扭曲现象。SDS处理前、后的荧光激发光谱和光破坏的研究表明Cyt b6f中的β-carotene不能有效地向Chl a传递光能，但对Chl a具有明显的光保护功能，因而说明β-carotene分子是Cyt b6f的天然结构和功能成分。根据这些实验结果和文献的有关报道，提出了β-carotene在Cyt b6f中可能的光保护机理模型，，即在Cyt b6f中，Chl a不是单线态氧的主要发生源，单线态氧主要由Rieske[Fe-s]中心产生，β-carotene不具有直接淬灭Chl a三线态的功能，其主要功能是作为抗氧化剂抵御Rieske[Fe-s]中心产生的单线态氧对Chl a的攻击，从而保护Cyt b6f中Chl a免受强光照射的破坏。 利用非变性凝胶电泳和硫酸铵沉淀对Chl a在Cyt b6f中的结合和解离现象进行了研究，观察到Chl a的解离与Rieske蛋白的解离及Cyt b6f复合体单体化的关系比较密切，膜脂能够有效地抵制这三个过程的发生，推测膜脂的作用位置位点可能位于Cyt b6f二聚体中两个单体之间的交界处。色素重组实验表明缺失Rieske[Fe-S]蛋白的Cyt b6f单体不能有效的和Chl a重组。 利用从菠菜叶绿体中分离纯化出的缺脂Cyt b6f与从菠菜类囊体分离纯化的膜脂进行体外重组，检测了不同膜脂对Cyt b6f催化电子传递活性的影响。结果表明：被检测的五种膜脂单半乳糖基甘油二酯（MGDG）、双半乳糖基甘油二酯 （DGDG），磷脂酰胆碱（PC），磷脂酰甘油（PG）和硫代异鼠李糖基甘油二酯（SQDG）对Cyt b6f催化电子传递的活性均有明显的促进作用，但促进的程度各不相同。不带电荷的MGDG和DGDG及分子整体呈电中性的PC对促进Cyt b6f催化电子传递的活性非常用效，最适条件下可分别使其活性提高89%、75%和77%;而带负电荷的PG和SQDG的活性促进作用则相对较弱，最适条件下仅可使其活性分别提高43%和26%。由此可见，膜脂对Cyt b6f活性的促进作用可能与这些膜脂分子的带电性质密切相关。

The spatial pattern of the small fish community in the Biandantang Lake - a small shallow lake along the middle reach of the Yangtze River, China

The spatial pattern of the small fish community was studied seasonally in 1996 in the Biandantang Lake. Based on plant cover, the lake was divided into five habitats, arranged in the order by plant structure complexity from complex to simple: Vallisneria spiralis habitat (V habitat), Vallisneria spiralis-Myriophyllum spicatum habitat (V-M habitat), Myriophyllum spicatum habitat (M habitat), Nelunbo nucefera habitat (N habitat), and no vegetation habitat (NV habitat). A modified popnet was used for quantitative sampling of small fishes. A total of 16 fish species were collected; Hypseleotris swinhonis, Ctenogobius giurinus, Pseudorasbora parva, Carassius auratus and Paracheilognathus imberis were the five numerically dominant species. In both summer and autumn, the total density of small fishes was about 10 ind m(-2). Generally, Ctenogobius giurinus, a sedatory, benthic fish, was distributed more or less evenly among the five habitats, while the other four species had lower densities in the N habitat and NV habitat, which had the simplest structures. The distribution of the small fish species showed seasonal variations. In winter, most species concentrated in the V habitat, which had the most complex structure. In spring, the fish had low densities in the N and NV habitat, and were more or less evenly distributed in the other habitats. In summer, the fish had a low density in the NV habitat, and were evenly distributed in the other habitats. In autumn, the fish had higher densities in the V-M and M habitats than in the others. Generally, spatial overlaps between the dominant species were higher in winter than in the other seasons. It was suggested that the variations in the importance of predation risk and resource competition in habitat choice determined the seasonal changes of spatial patterns in the small fishes in the Biandantang Lake.

The second dissociation threshold bound levels of hydrogen molecule

The near-threshold highly bound states of all three stable isotopic variants of molecular hydrogen have been studied. Numerous perturbations and unexpected transitions are observed as far as 1cm(-1) just below the second dissociation threshold. This complex structure may arise from a combination of nonadiabatic coupling between B, B', C electronic states, perturbations due to. ne and hyperfine interactions, and strong shape resonances. The perturbed near-threshold states and vibrational continuum exhibit finegrained structure, differing greatly between isotopes because of varying nonadiabatic coupling.

杯芳烃羧酸萃取稀土、钍与含杯配合物结构研究

本文以大环化合物杯芳烃羧酸为萃取体系，系统考察稀土元素在该体系中的萃取分离性能，比较了钍与稀土元素的萃取性质差异，从而为杯芳烃羧酸在该分离领域中的应用提供一定的实验数据，此外，采用无机水热合成制备了含杯[8]芳烃的三元超分子配位聚合物并表征其结构，具体研究内容如下： 1、 合成杯芳烃并进行化学修饰得萃取剂杯芳烃羧酸，采用熔点测定、元素分析、TG-DTA、FT-IR和1H-NMR等分析方法表征，并利用两相滴定法测定了杯芳烃羧酸的基本常数。 2、 研究杯芳烃羧酸-CHCl3/RE-HCl萃取体系碱金属离子、离子强度、酸度、温度和萃取剂浓度对Eu(III)的萃取分配比影响，并分析其萃取机理。在此基础上，探索杯芳烃羧酸的协同萃取性能，发现杯[4]芳烃羧酸与伯胺N1923的ABC酸碱耦合协萃体系对轻、中、重稀土有不同的协萃能力，协萃系数与原子序数呈“双峰效应”。 3、 在萃取热力学基础上，利用层流恒界面池研究杯[4]芳烃羧酸萃取Nd(III)的动力学性质，确定了萃取反应控制模式随条件不同有所变化，化学反应在相界面上进行，并获得了萃取反应速率方程。 4、 以杯芳烃羧酸-CHCl3/Th-HCl体系研究钍的萃取性能，考察了碱金属离子、离子强度、酸度、温度和萃取剂浓度对Th(IV)的萃取影响，比较其与稀土萃取性能的差异，并在此基础上进一步研究与伯胺N1923协同萃取钍的性能，分析了协同萃取反应机制。 5、 水热合成并表征了含磺化杯[8]芳烃，2，2’-联吡啶与镍的三元超分子配合物。磺化杯[8]在该配合物中呈“双-反向锥式”构型，分子间由氢键和C-H…π相互作用将四核Ni簇连接成三维超分子结构。

生态恢复后的千烟洲植物群落种类组成及结构特征

Qianyanzhou(QYZ) Ecological Station established in 1983 with an area of 204 hm~2 is affiliated to the Chinese Ecosystem Research Network.Before 1982,herbs had been dominant,sparsely dotted with shrubs.After 20-year restoration of the vegetation,the vegetation showed significant changes in both forest coverage and species diversity.Forest coverage had increased to 93.3% in 1999 from 0.4% in 1982.The vegetation could be broadly classified into two groups: artificial forest,accounting for the most percent,and natural secondary forest.These two groups could be subdivided into 12 types.Based on the 2003 field work,The authors studied plant community composition and vertical structure.The results were as follows: 1) On the study plots were there about 150 species,of which 100,49,and 47 grew in arbor layer and shrub layer and herb layer,respectively.Of 12 community types,the amount of species in shrub layer was larger than that of other two layers.As to the species richness in the different community types,Liquidambar formosana community showed the highest and Imperata cylindrical var.major community the least.The amount of species in arbor layer of artificial forest was smaller than those of natural Pinus massoniana forest,but no difference in understory.2) Loropetalum chinense,Quercus fabric and Vaccinium bracteatum were dominant shrub species with a wide distribution.Three ferns Woodwardia japonica、Dryopteris atrata and Dicrannepteris dichotoma were dominant herb species.Lianas were sparse,but Milletlia reticulata were found in all forest types.3) Up to now some natural regeneration species,such as Eurya muricata、Quercus fabri、Vaccinium bracteatum、Rhus chinensis、Adinandra bockiana,had grown in the arbor layer of artificial forests.Some herb species,such as Arundinella setosa、Miscanthus floridulus、Isachne globosa、Scirpus triqueter,which were dominant ones in the herb layer before the restoration of vegetation,disappeared now.4) The vertical structure of natural Pinus massoniana community and Liquidambar formosana community showed more complex comparing with artificial forests.For the artificial forests,the conifer and broad-leaves mixed forest had a more complex structure.In both natural Pinus(massoniana) community and Liquidambar formosana community,it was dominated by individuals with height of 3～4 m,while 10～12 m in the artificial forests.

Carbon dioxide/propylene oxide coupling reaction catalyzed by chromium salen complexes

A series of chromium/Schiff base complexes N,N'-bis(salicylidene)-1,2-phenylenediamino chromium(III) X were prepared and employed for the alternating copolymerization of carbon dioxide with racemic propylene oxide in the presence of (4-dimethylamino)pyridine. The effect of the complex structure and reaction conditions on the catalytic activity, the poly(propylene carbonate)/cyclic carbonate (PPC/PC) selectivity, and the polymer head-to-tail linkages was examined. The experiments indicated that N,N'-bis(3,5-di-tert-butylsalicylidene)-1,2-phenylenediamino chromium(III) (NO3) exhibited the highest PPC/PC selectivity as well as polymer head-to-tail linkages and N,N'-bis(3,5-dichlorosalicylidene)-1,2-phenylenediimino chromiu(III) (NO3) possessed the highest catalytic activity among these chromium/Schiff base complexes. The structure of the produced copolymer was characterized by the IR, H-1 NMR, and C-13 NMR measurements.

Calculation of bulk modulus on carbon nitrides with chemical bond method

The bulk moduli of some superhard materials were calculated by using the chemical bond method. For simple crystals, such as diamonds, c-BN, SiC, Si, BP, and Ge, the calculated results agree with experimental and theoretical values. For crystals of complex structure, such as beta-BC2N crystal and various structural C3N4 crystals, the results indicate that their bulk moduli are large, but do not exceed that of diamond.

Investigation on relationship between charge transfer position and dielectric definition of average energy gap in Eu3+-doped compounds

The dielectric definition of average energy gap E-g of the chemical bond has been calculated quantitatively in Eu3+-doped 30 lanthanide compounds based on the dielectric theory of chemical bond for complex structure crystals. The relationship between the experimental charge transfer (CT) energy of Eu3+ and the corresponding average energy gap E-g has been studied. The results show that the CT energy increases linearly with increasing of the average energy gap E-g. The linear model is obtained. It allows us to predict the CT position of Eu3+-doped lanthanide compounds with knowledge of the crystal structure and index of refraction. Applied to the Ca4GdO(BO3)(3):Eu and Li2Lu5O4(BO3)(3):Eu crystals, the predicted results of CT energies are in good agreement with the experimental values, and it can be concluded that the lowest CT energy in Li2Lu5O4(BO3)(3):Eu originates from the site of Lu1.

Facile sonochemical synthesis of single-crystalline europium fluorine with novel nanostructure

A single-crystalline EuF3 nanoflower with a novel three-dimensional (3D) nanostructure has been successfully synthesized via a facile, fast, efficient, and mild ultrasonic irradiation solution route employing the reaction of Eu(NO3)(3) and KBF4 under ambient conditions without any template or surfactant. The ultrasonic irradiation plays an important role and is necessary for the synthesis of EuF3 with the complex structure. The formation mechanism of this complex nanostructure is proposed in this paper. No template or surfactant is used in this method, which avoids the subsequent complicated workup for the removal of the template or surfactant. Furthermore, a substantial reduction in the reaction time as well as the reaction temperature is observed compared with the hydrothermal process.

A study of resonance electron capture ionization on a quadrupole tandem mass spectrometer

Procedures that allow the realization of resonance electron capture (REC) mode on a commercial triple-quadrupole mass spectrometer, after some simple modifications, are described, REC mass spectrometry (MS) and tandem mass spectrometry (MS/MS) experiments were performed and spectra for some compounds were recorded. In particular, the charge-remote fragmentation (CRF) spectra of [M - H](-) ions of docosanoic and docosenoic acids under low-energy collisionally activated dissociation (CAD) conditions were obtained, and showed that there were no significant differences for [M - H](-) ions produced at different resonances (i,e. for [M - H](-) ions with different structures). This observation was explained on the basis of results obtained from deuterium-labeled fatty acids, which showed that different CRF ions (but with the same m/z value in the absence of labels) could be produced by different mechanisms, and all of them were obviously realized under CAD conditions that made spectra practically indistinguishable. The other example, which compared the REC-MS/MS spectrum of [M - H](-) ions and EI-MS/MS spectrum of M+. ions of daidzein, demonstrated the potential of the REC-MS/MS technique for more complex structure elucidation. Copyright (C) 2000 John Wiley & Sons, Ltd.

Refining near-native protein-protein docking decoys by local resampling and energy minimization

How to refine a near-native structure to make it closer to its native conformation is an unsolved problem in protein-structure and protein-protein complex-structure prediction. In this article, we first test several scoring functions for selecting locally resampled near-native protein-protein docking conformations and then propose a computationally efficient protocol for structure refinement via local resampling and energy minimization. The proposed method employs a statistical energy function based on a Distance-scaled Ideal-gas REference state (DFIRE) as an initial filter and an empirical energy function EMPIRE (EMpirical Protein-InteRaction Energy) for optimization and re-ranking. Significant improvement of final top-1 ranked structures over initial near-native structures is observed in the ZDOCK 2.3 decoy set for Benchmark 1.0 (74% whose global rmsd reduced by 0.5 angstrom or more and only 7% increased by 0.5 angstrom or more). Less significant improvement is observed for Benchmark 2.0 (38% versus 33%). Possible reasons are discussed.

Bioorganic/inorganic hybrid composition of sponge spicules: Matrix of the giant spicules and of the comitalia of the deep sea hexactinellid Monorhaphis

The giant basal spicules of the siliceous sponges Monorhaphis chuni and Monorhaphis intermedia (Hexactinellida) represent the largest biosilica structures on earth (up to 3 m long). Here we describe the construction (lamellar organization) of these spicules and of the comitalia and highlight their organic matrix in order to understand their mechanical properties. The spicules display three distinct regions built of biosilica: (i) the outer lamellar zone (radius: >300 mu m), (ii) the bulky axial cylinder (radius: <75 mu m), and (iii) the central axial canal (diameter: <2 mu m) with its organic axial filament. The spicules are loosely covered with a collagen net which is regularly perforated by 7-10 mu m large holes; the net can be silicified. The silica layers forming the lamellar zone are approximate to 5 mu m thick; the central axial cylinder appears to be composed of almost solid silica which becomes porous after etching with hydrofluoric acid (HF). Dissolution of a complete spicule discloses its complex structure with distinct lamellae in the outer zone (lamellar coating) and a more resistant central part (axial barrel). Rapidly after the release of the organic coating from the lamellar zone the protein layers disintegrate to form irregular clumps/aggregates. In contrast, the proteinaceous axial barrel, hidden in the siliceous axial cylinder, is set up by rope-like filaments. Biochemical analysis revealed that the (dominant) molecule of the lamellar coating is a 27-kDa protein which displays catalytic, proteolytic activity. High resolution electron microscopic analysis showed that this protein is arranged within the lamellae and stabilizes these surfaces by palisade-like pillars. The mechanical behavior of the spicules was analyzed by a 3-point bending assay, coupled with scanning electron microscopy. The load-extension curve of the spicule shows a biphasic breakage/cracking pattern. The outer lamellar zone cracks in several distinct steps showing high resistance in concert with comparably low elasticity, while the axial cylinder breaks with high elasticity and lower stiffness. The complex bioorganic/inorganic hybrid composition and structure of the Monorhaphis spicules might provide the blueprint for the synthesis of bio-inspired material, with unusual mechanical properties (strength, stiffness) without losing the exceptional properties of optical transmission. (C) 2007 Elsevier Inc. All rights reserved.