Surface mucous as a source of genomic DNA from Atlantic billfishes (Istiophoridae) and swordfish (Xiphiidae)

Procedures for sampling genomic DNA from live billfishes involve manual restraint and tissue excision that can be difficult to carry out and may produce stresses that affect fish survival. We examined the collection of surface mucous as a less invasive alternative method for sourcing genomic DNA by comparing it to autologous muscle tissue samples from Atlantic blue marlin (Makaira nigricans), white marlin (Tetrapturus albidus), sailfish (Istiophorus platypterus), and swordfish (Xiphias gladius). Purified DNA from mucous was comparable to muscle and was suitable for conventional polymerase chain reaction, random amplified polymorphic DNA analysis, and mitochondrial and nuclear locus sequencing. The nondestructive and less invasive characteristics of surface mucous collection may promote increased survival of released specimens and may be advantageous for other marine fish genetic studies, particularly those involving large live specimens destined for release.

Liver genomic responses to ciguatoxin: evidence for activation of Phase I and Phase II detoxification pathways following an acute hypothermic response in mice

Ciguatoxins (CTX) are polyether neurotoxins that target voltage-gated sodium channels and are responsible for ciguatera, the most common fish-borne food poisoning in humans. This study characterizes the global transcriptional response of mouse liver to a symptomatic dose (0.26 ng/g) of the highly potent Pacific ciguatoxin-1 (P-CTX-1). At 1 h post-exposure 2.4% of features on a 44K whole genome array were differentially expressed (p ≤ 0.0001), increasing to 5.2% at 4 h and decreasing to 1.4% by 24 h post-CTX exposure. Data were filtered (|fold change| ≥ 1.5 and p ≤ 0.0001 in at least one time point) and a trend set of 1550 genes were used for further analysis. Early gene expression was likely influenced prominently by an acute 4°C decline in core body temperature by 1 h, which resolved by 8 h following exposure. An initial downregulation of 32 different solute carriers, many involved in sodium transport, was observed. Differential gene expression in pathways involving eicosanoid biosynthesis and cholesterol homeostasis was also noted. Cytochrome P450s (Cyps) were of particular interest due to their role in xenobiotic metabolism. Twenty-seven genes, mostly members of Cyp2 and Cyp4 families, showed significant changes in expression. Many Cyps underwent an initial downregulation at 1 h but were quickly and strongly upregulated at 4 and 24 h post-exposure. In addition to Cyps, increases in several glutathione S-transferases were observed, an indication that both phase I and phase II metabolic reactions are involved in the hepatic response to CTX in mice.

Dispersion, population dynamics and stock assessment of Caspian Sea prawns, genus Palaemon in Guilan Province coastal waters

Biological aspects, population dynamics and stock assessment of the Caspian Sea prawns Palaemon adspersus and Palaemon eleganse were investigated in Guilan coastal water of the Caspian Sea. Sampling was done monthly with a bottom trawl with mesh size of 3 mm in cod end in 0 - 5 m and 5 - 10 m depth in areas as Astra, Shafa Roud, Anzali, Chonchanan Chamkhaleh and Chaboksar during year 2002. Results of one year sampling showed that mean total length of Palaemon adspersus (pooled data) was 39.9±6.84 mm (X±SD) and mean wiegth was 1.133±0.67 g. The mean total length of females and males was 41.6±7.5 mm and 37.9±5.2 mm respectively and mean weight for the mentioned sexes was 1.353±0.65 g and 0.868±0.38 g respectively. There was significant differences in mean length and weight of females and males (P<0.05). The mean total annual sex ratio of males: females for this species was 1.4 and this sex ratio deviated significantly from 1:1 (X2, P<0.05) and biased towards males in the population of this species. The spawning season of Palaemon adspersus begins in April and ends in September with a peak in June . Mean fecundity of this species was 1994.5 ± 506.6 . The growth coefficients Loo and K for females were estimated as 58.5 mm and 2.3 /Year and for males as 55.9 mm and 2.6 /year respectively . The mean CPUA ( catch / Km2 ) for this species was 9.99 ± 33.2 kg / km2 and the correspondance biomass was calculated as 5067.7 kg in 0 - 10 m depth . The mean total length of Palaemon elegans (pooled data ) was 27.5 ± 5.7 mm (X±S.D) and mm and 24.01±4.18 mm respectively and mean weight for the mentioned sexes were was 0.553 ± 0.3 g and 0.237±0.15 g respectively. There was significant differences in mean length and weight of females and males (P<0.05). The mean total annual sex ratio of males:females for this species was 0.57 and in this species also sex ratio differed significantly from 1:1 (X2, P<0.05) and skewed towards females in the population of this species. The spawning season of Palaemon elegans extended from May to September with a peak in July . Mean fecundity of this species was 642.7±313.4. The growth coefficients LOO and K for females were estimated as 42.119 mm and 2.40 /Year and 33.87 mm and 2.50 /year for males respectively. The mean. CPUA ( catch/ Km2 ) for this species was 0.75±3.86 kg/km2 and the correspondance biomass was calculated as 382.1 kg in 0-10 m depth .