Genome-wide association of multiple complex traits in outbred mice by ultra low-coverage sequencing


Autoria(s): Nicod, Jérôme; Davies, Robert W.; Cai, Na; Hassett, Carl; Goodstadt, Leo; Cosgrove, Cormac; Yee, Benjamin K; Lionikaite, Vikte; McIntyre, Rebecca E; Remme, Carol Ann; Lodder, Elisabeth; Gregory, Jennifer S; Hough, Tertius; Joynson, Russell; Phelps, Hayley; Nell, Barbara; Rowe, Clare; Wood, Joe; Walling, Alison; Bopp, Nasrin; Bhomra, Amarjit; Hernandez-Pliego, Polinka; Callebert, Jacques; Aspden, Richard M; Talbot, Nick P; Robbins, Peter A; Harrison, Mark; Fray, Martin; Launay, Jean-Marie; Pinto, Yigal M.; Blizard, David A; Bezzina, Connie R; Adams, David J; Franken, Paul; Weaver, Tom; Wells, Sara; Brown, Steve DM; Potter, Paul K; Klenerman, Paul; Lionikas, Arimantas; Mott, Richard; Flint, Jonathan
Contribuinte(s)

University of Aberdeen, Medicine, Medical Sciences & Nutrition, Applied Medicine

University of Aberdeen, Medicine, Medical Sciences & Nutrition, Medical Sciences

Data(s)

05/08/2016

05/08/2016

04/07/2016

Resumo

We thank the High-Throughput Genomics Group at the Wellcome Trust Centre for Human Genetics and the Wellcome Trust Sanger Institute for the generation of the sequencing data. This work was funded by Wellcome Trust grant 090532/Z/09/Z (J.F.). Primary phenotyping of the mice was supported by the Mary Lyon Centre and Mammalian Genetics Unit (Medical Research Council, UK Hub grant G0900747 91070 and Medical Research Council, UK grant MC U142684172). D.A.B acknowledges support from NIH R01AR056280. The sleep work was supported by the state of Vaud (Switzerland) and the Swiss National Science Foundation (SNF 14694 and 136201 to P.F.). The ECG work was supported by the Netherlands CardioVascular Research Initiative (Dutch Heart Foundation, Dutch Federation of University Medical Centres, the Netherlands Organization for Health Research and Development, and the Royal Netherlands Academy of Sciences) PREDICT project, InterUniversity Cardiology Institute of the Netherlands (ICIN; 061.02; C.A.R., C.R.B). Na Cai is supported by the Agency of Science, Technology and Research (A*STAR) Graduate Academy. The authors wish to acknowledge excellent technical assistance from: Ayako Kurioka, Leo Swadling, Catherine de Lara, James Ussher, Rachel Townsend, Sima Lionikaite, Ausra S. Lionikiene, Rianne Wolswinkel and Inge van der Made. We would like to thank Thomas M Keane and Anthony G Doran for their help in annotating variants and adding the FVB/NJ strain to the Mouse Genomes Project.

Peer reviewed

Postprint

Formato

10

Identificador

Nicod , J , Davies , R W , Cai , N , Hassett , C , Goodstadt , L , Cosgrove , C , Yee , B K , Lionikaite , V , McIntyre , R E , Remme , C A , Lodder , E , Gregory , J S , Hough , T , Joynson , R , Phelps , H , Nell , B , Rowe , C , Wood , J , Walling , A , Bopp , N , Bhomra , A , Hernandez-Pliego , P , Callebert , J , Aspden , R M , Talbot , N P , Robbins , P A , Harrison , M , Fray , M , Launay , J-M , Pinto , Y M , Blizard , D A , Bezzina , C R , Adams , D J , Franken , P , Weaver , T , Wells , S , Brown , S D M , Potter , P K , Klenerman , P , Lionikas , A , Mott , R & Flint , J 2016 , ' Genome-wide association of multiple complex traits in outbred mice by ultra low-coverage sequencing ' Nature Genetics . , 10.1038/ng.3595

1061-4036

PURE: 65443434

PURE UUID: 60bb00f1-9590-4fa9-90bf-a250761647be

http://hdl.handle.net/2164/7021

http://dx.doi.org/10.1038/ng.3595

Idioma(s)

eng

Relação

Nature Genetics

Palavras-Chave #R Medicine #QH426 Genetics #Wellcome Trust #090532/Z/09/Z #097308/Z/11/Z #Medical Research Council (MRC) #G0900747 91070 #U142684172 #R #QH426
Tipo

Journal article