Targeted sequencing for high-resolution evolutionary analyses following genome duplication in salmonid fish : Proof of concept for key components of the insulin-like growth factor axis


Autoria(s): Lappin, Fiona M; Shaw, Rebecca L; Macqueen, Daniel J
Contribuinte(s)

University of Aberdeen, School of Biological Sciences

University of Aberdeen, School of Biological Sciences, Biological Sciences

Data(s)

01/08/2016

01/08/2016

23/06/2016

Resumo

Acknowledgements This study was funded by a Natural Environment Research Council grant (NERC, project code: NBAF704). FML is funded by a NERC Doctoral Training Grant (Project Reference: NE/L50175X/1). RLS was an undergraduate student at the University of Aberdeen and benefitted from financial support from the School of Biological Sciences. DJM is indebted to Dr. Steven Weiss (University of Graz, Austria), Dr. Takashi Yada (National Research Institute of Fisheries Science, Japan), Dr. Robert Devlin (Fisheries and Oceans Canada, Canada), Prof. Samuel Martin (University of Aberdeen, UK), Mr. Neil Lincoln (Environment Agency, UK) and Prof. Colin Adams/Mr. Stuart Wilson (University of Glasgow, UK) for providing salmonid material or assisting with its sampling. We are grateful to staff at the Centre for Genomics Research (University of Liverpool, UK) (i.e. NERC Biomolecular Analysis Facility – Liverpool; NBAF-Liverpool) for performing sequence capture/Illumina sequencing and providing us with details on associated methods that were incorporated into the manuscript. Finally, we are grateful to the organizers of the Society of Experimental Biology Satellite meeting 'Genome-powered perspectives in integrative physiology and evolutionary biology' (held in Prague, July 2015) for inviting us to contribute to this special edition of Marine Genomics and hosting a really stimulating meeting.

Peer reviewed

Publisher PDF

Identificador

Lappin , F M , Shaw , R L & Macqueen , D J 2016 , ' Targeted sequencing for high-resolution evolutionary analyses following genome duplication in salmonid fish : Proof of concept for key components of the insulin-like growth factor axis ' Marine Genomics . , 10.1016/j.margen.2016.06.003

1874-7787

PURE: 69048033

PURE UUID: 45f5bc9e-06ca-4085-a999-8a26cbe74abe

PubMed: 27346185

http://hdl.handle.net/2164/6303

http://dx.doi.org/10.1016/j.margen.2016.06.003

Idioma(s)

eng

Relação

Marine Genomics

Direitos

© 2016 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

Palavras-Chave #sequence capture #target enrichment #second-generation sequencing #whole genome duplication #salmonid fish #insulin-like growth factor fish #QH301 Biology #Natural Environment Research Council (NERC) #NBAF704 #NE/L50175X/1 #QH301
Tipo

Journal article