Individual codes, GenBank accession numbers and GenBank accession links for sponge-associated actinobacterial isolates
| Cobertura |
LATITUDE: 45.081000 * LONGITUDE: 13.638000 * DATE/TIME START: 2008-08-01T00:00:00 * DATE/TIME END: 2008-08-01T00:00:00 |
|---|---|
| Data(s) |
03/12/2015
|
| Resumo |
Here, we report the draft genome sequences of three actinobacterial isolates, Micromonospora sp. RV43, Rubrobacter sp. RV113, and Nocardiopsis sp. RV163 that had previously been isolated from Mediterranean sponges. The draft genomes were analyzed for the presence of gene clusters indicative of secondary metabolism using antiSMASH 3.0 and NapDos pipelines. Our findings demonstrated the chemical richness of sponge-associated actinomycetes and the efficacy of genome mining in exploring the genomic potential of sponge-derived actinomycetes. |
| Formato |
text/tab-separated-values, 21 data points |
| Identificador |
https://doi.pangaea.de/10.1594/PANGAEA.855522 doi:10.1594/PANGAEA.855522 |
| Idioma(s) |
en |
| Publicador |
PANGAEA |
| Direitos |
CC-BY: Creative Commons Attribution 3.0 Unported Access constraints: unrestricted |
| Fonte |
Supplement to: Horn, Hannes; Hentschel, Ute; Abdelmohsen, Usama Ramadan (2015): Mining Genomes of Three Marine Sponge-Associated Actinobacterial Isolates for Secondary Metabolism. Genome Announcements, 3(5), e01106-15, doi:10.1128/genomeA.01106-15 |
| Palavras-Chave | #Accession number; Accession number, link; Area/locality; Date/Time of event; Depth, bottom/max; Depth, top/min; DIVER; Latitude of event; Longitude of event; Rovinj_082008; Sampling by diver; Species; Species code |
| Tipo |
Dataset |
