Registry of all samples from the Tara Oceans Expedition (2009-2013)

Autoria(s): Tara Oceans Consortium, Coordinators; Tara Oceans Expedition, Participants
Cobertura

MEDIAN LATITUDE: 34.166634 * MEDIAN LONGITUDE: -149.151000 * SOUTH-BOUND LATITUDE: -64.382200 * WEST-BOUND LONGITUDE: 60.722600 * NORTH-BOUND LATITUDE: 79.677700 * EAST-BOUND LONGITUDE: -38.350498 * DATE/TIME START: 2009-09-05T00:00:00 * DATE/TIME END: 2013-12-06T09:30:00
Data(s)

25/04/2016
Resumo

The Tara Oceans Expedition (2009-2013) sampled the world oceans on board a 36 m long schooner, collecting environmental data and organisms from viruses to planktonic metazoans for later analyses using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. Data sets in this collection provide methodological and environmental context to all samples collected during the Tara Oceans Expedition (2009-2013).
Formato

application/zip, 4 datasets
Identificador

https://doi.pangaea.de/10.1594/PANGAEA.859953

doi:10.1594/PANGAEA.859953
Idioma(s)

en
Publicador

PANGAEA
Direitos

CC-BY: Creative Commons Attribution 3.0 Unported

Access constraints: unrestricted
Palavras-Chave #[abbreviation] description (ENVO:ID); [abbreviation] full name (MRGID:ID); [NO2]-; abbreviation; Age; Angular scattering coefficient, 470 nm; at a depth of 10 m, below the surface; at the base of the euphotic zone (zeu(0.415)), calculated from Kd(PAR)1, values of 30-day average daily surface PAR from AMODIS products, and equations in Boss and Berhenfeld (2010); at the base of the euphotic zone (zeu(0.415)), calculated from Kd(PAR)2, values of 30-day average daily surface PAR from AMODIS products, and equations in Boss and Berhenfeld (2010); at the depth of maximum Brunt Väisälä frequency; at the depth of maximum chlorophyll fluorescence; at the depth of maximum oxygen concentration; at the depth of minimum oxygen concentration; at the depth of the mixed layer (based on sigma theta); at the depth of the mixed layer (based on temperature); at the depth of the nitracline; at the sampling location, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid); at the sampling location and date; at the sampling location and date, expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid); at the sampling location and date [early, middle or late]; at the sampling location and date [Values<0 indicate inside an eddy; Values>0 indicate outside an eddy]; at the sampling location and date [Values>0.1 indicate the presence of a transport front]; at the sampling location for a period of 30 days around the sampling date; at the sampling location for a period of 8 days around the sampling date; bac660; Backscattering coefficient of particles, 470 nm; bacp660; based on sigma theta; based on temperature; Bathy depth; bb470; bbp470; Beam attenuation coefficient of particles; beta470; BG province; Biogeographical province; Brunt-Väisälä frequency; C. pocillum; Calculated (d'Ovidio et al. 2010); calculated from 30-day avg. Kd490 (AMODIS) using eq. 9' in Morel et al. (2007); calculated from 30-day avg. Kd490 (AMODIS) using eq. 9 in Morel et al. (2007); calculated from AMODIS products; calculated from in situ sensors calibrated using factory settings (Tara Oceans); calculated from in situ sensors calibrated using water samples (Tara Oceans); calculated from in situ sensors calibrated using WOA09 climatology (Tara Oceans); calculated from Kd(PAR)1 and 30-day avg. daily surface PAR (AMODIS); calculated from Kd(PAR)2 and 30-day avg. daily surface PAR (AMODIS); calculated from measurements on water samples (Tara Oceans); calculated from VGPM products; calculated from z(SD) and 30-day avg. PAR (AMODIS); chemical treatment of the processed sample, recommended by the protocol; Chl a; Chlorophyll a; Cladonia pocillum; complementary; Cond; Conductivity; day length; D chl m; Density, sigma-theta (0); Depth, bathymetric; Depth, bottom/max; Depth, nominal; Depth, reference; Depth, top/min; Depth bot; Depth max Brunt Väisälä freq; Depth max O2; Depth min O2; Depth nitracline; Depth of chlorophyll maximum; Depth of maximum Brunt Väisälä frequency; Depth of maximum oxygen concentration; Depth of minimum oxygen concentration; Depth of nitracline; Depth of Secchi Disk; Depth of the euphotic zone; Depth ref; Depth top; Description; device used for the lower threshold of the size fraction; device used for the upper threshold of the size fraction; Diffuse attenuation coefficient at 490 nm; Diffuse attenuation coefficient of PAR; Distance; early, middle, or late; Env feature; Environmental feature; Event; fCDOM; File name; Fluorescence, colored dissolved organic matter; for a period of 30 days around sampling date and at the sampling location; for a period of 8 days around sampling date and at the sampling location; from the closest geographic coordinate on a coast; from which in situ sensor data were obtained to describe the environmental feature; full name (ENVO:ID); Geostrophic velocity, latitudinal; Geostrophic velocity, longitudinal; IHO General Sea Areas (1953) registered at www.marineregions.org; indicates if the phase of the moon is ascending (1) or descending (-1); indicates the presence of an eddy. Values<1 indicate "inside an eddy"; Values>1 indicate "outside an eddy"; indicates the presence of a transport front. Values>0.1 are characteristic of fronts; indicates the proportion of illuminated/total moon flat area visible from Earth; INSDC sample accession number; in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836319); in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321); in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), based on fluorescence; in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), based on sigma theta; in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), based on temperature; in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), corrected for temperature drift of the sensor, using c(660) values at depth (assumed to be close to the attenuation coefficient of pure seawater); in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), expressed in ppb QSE (i.e. fluorescence emitted by 1 ppb of quinine sulfate diluted in 0.05 M sulfuric acid); in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), includes attenuation by particulate and dissolved matter and water molecules; in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), includes backscattering by particulate and dissolved matter and water molecules; in the selected environmental feature (source data: http://doi.pangaea.de/10.1594/PANGAEA.836321), in situ dark; Kd(PAR); Kd(PAR)1 is calculated for a layer, which thickness is equal to [Kd(490)]?1; Kd(PAR)2 is calculated for a layer, which thickness is equal to 2*[Kd(490)]?1; Kd490; label; Label; Latitude; Latitude+; Longhurst (2007); Longhurst (2007) registered at marineregions.org; Longitude; Longitude+; lower threshold (in micrometres) of the size fraction; Marine biome; Maximum Lyapunov exponent; MDL; Mixed layer depth; Mixed layer depth, upper; MLE; Moon phase, nominal; Moon phase, proportion; Moon phase nominal; Moon phase proportion; MP biome; N2; Net primary production of carbon; Nitrate; Nitrate and Nitrite; Nitrite; NO3; NO3+NO2; NPP C; number of days since the sampled water mass has left a continental shelf with a bathymetry <500 m, based on a back-calculated geostrophic current trajectory; Ocean and sea region; of related biomolecular data; of related contextual data; of replicate samples; of subsamples, i.e. when the sample material was split into several containers; of the closest geographic coordinate on a coast; of the continental shelf with a bathymetry <500 m where the sampled water mass originated, based on a back-calculated geostrophic current trajectory; of the drylab logsheet (pdf) where this sample was recorded; of the environmental feature; of the event logsheet (pdf) where this sample was recorded; of the geographic coordinate where the sampled water mass originated 45 days before the sampling date, based on a back-calculated geostrophic current trajectory; of the water mass. Values>30 indicate "old water mass"; Values<30 indicate "young water mass"; of the water mass at the sampling location and date [Values>30 indicate old water mass; Values<30 indicate young water mass]; of the wetlab logsheet (pdf) where this sample was recorded; Okubo-Weiss parameter; operator; Optical backscattering coefficient, 470 nm; Optical beam attenuation coefficient, 660 nm; OS region; OW; Oxygen; OXYGEN; PAR day; Phosphate; PO4; protocol-label_size-fraction; published at PANGAEA, Data Publisher for Earth and Environmental Science; published at the European Nucleotides Archive; quantity of sample material to be processed, recommended by the protocol; Radiation, photosynthetically active per day; recommended by the protocol; Residence time; RT; Sal; Salinity; Sample code/label; sample container type (volume), recommended by the protocol; sample content, recommended by the protocol; Sample ID; Sample material; Sample method; Sample repository; Samp material; Samp method; Samp rep; Season; Sea surface temperature gradient, horizontal; Si(OH)4; Sigma-theta; Silicate; spring, summer, autumn, or winter; SSD; SSM index; SST grad h; Station; Strain sub-mesoscale index; Sunshine duration; TARA_barcode#; TARA_event-datetime_station#_event-type; TARA_event-datetime_station#_event-type_environmental-feature_(depth)_protocol-label_size-fraction_sample-barcode; TARA_station#; TARA_station#_environmental-feature_protocol-label_size-fraction; Tara Oceans Consortium; Tara Oceans Expedition; Temp; Temperature, water; Temperature, water, potential; temperature treatment for storage, recommended by the protocol; terms registered at EnvO, the Environmental Ontology; TOC; TOE-2009-2013; Tpot; u; UMLD; Uniform resource locator/link to metadata file; Uniform resource locator/link to reference; upper threshold (in micrometres) of the size fraction; URL meta; URL ref; v; z(eu); z(SD); zeu(0.415) is the depth of the 0.415 mol quanta m^-2 day^-1 light level
Tipo

Dataset
Acesso ao item digital