Whole-mitochondrial genome sequencing in primary open-angle glaucoma using massively parallel sequencing identifies novel and known pathogenic variants


Autoria(s): Sundaresan, Periasamy; Simpson, David A.; Sambare, Chitra; Duffy, Seamus; Lechner, Judith; Dastane, Aditi; Dervan, Edward W; Vallabh, Neeru; Chelerkar, Vidya; Deshpande, Madan; O'Brien, Colm; McKnight, Amy Jayne; Willoughby, Colin E
Data(s)

2015

Resumo

Purpose:The aim of this study was to determine whether mutations in mitochondrial DNA play a role in high-pressure primary open-angle glaucoma (OMIM 137760) by analyzing new data from massively parallel sequencing of mitochondrial DNA.<br/>Methods:Glaucoma patients with high-tension primary open-angle glaucoma and ethnically matched and age-matched control subjects without glaucoma were recruited. The entire human mitochondrial genome was amplified in two overlapping fragments by long-range polymerase chain reaction and used as a template for massively parallel sequencing on an Ion Torrent Personal Genome Machine. All variants were confirmed by conventional Sanger sequencing.<br/>Results:Whole-mitochondrial genome sequencing was performed in 32 patients with primary open-angle glaucoma from India (n = 16) and Ireland (n = 16). In 16 of the 32 patients with primary open-angle glaucoma (50% of cases), there were 22 mitochondrial DNA mutations consisting of 7 novel mutations and 8 previously reported disease-associated sequence variants. Eight of 22 (36.4%) of the mitochondrial DNA mutations were in complex I mitochondrial genes.<br/>Conclusion:Massively parallel sequencing using the Ion Torrent Personal Genome Machine with confirmation by Sanger sequencing detected a pathogenic mitochondrial DNA mutation in 50% of the primary open-angle glaucoma cohort. Our findings support the emerging concept that mitochondrial dysfunction results in the development of glaucoma and, more specifically, that complex I defects play a significant role in primary open-angle glaucoma pathogenesis.

Identificador

http://pure.qub.ac.uk/portal/en/publications/wholemitochondrial-genome-sequencing-in-primary-openangle-glaucoma-using-massively-parallel-sequencing-identifies-novel-and-known-pathogenic-variants(0c01737b-7346-4791-bf56-63a69259f62c).html

http://dx.doi.org/10.1038/gim.2014.121

Idioma(s)

eng

Direitos

info:eu-repo/semantics/restrictedAccess

Fonte

Sundaresan , P , Simpson , D A , Sambare , C , Duffy , S , Lechner , J , Dastane , A , Dervan , E W , Vallabh , N , Chelerkar , V , Deshpande , M , O'Brien , C , McKnight , A J & Willoughby , C E 2015 , ' Whole-mitochondrial genome sequencing in primary open-angle glaucoma using massively parallel sequencing identifies novel and known pathogenic variants ' Genetics in medicine , vol 17 , pp. 279-284 . DOI: 10.1038/gim.2014.121

Tipo

article