Self-similarity limits of genomic signatures


Autoria(s): 武作兵
Data(s)

2003

Resumo

It is shown that metric representation of DNA sequences is one-to-one. By using the metric representation method, suppression of nucleotide strings in the DNA sequences is determined. For a DNA sequence, an optimal string length to display genomic signature in chaos game representation is obtained by eliminating effects of the finite sequence. The optimal string length is further shown as a self-similarity limit in computing information dimension. By using the method, self-similarity limits of bacteria complete genomic signatures are further determined.

Identificador

http://dspace.imech.ac.cn/handle/311007/33725

http://www.irgrid.ac.cn/handle/1471x/2711

Idioma(s)

英语

Fonte

Fractals-Complex Geometry Patterns and Scaling in Nature and Society.2003,11(1):19-25

Palavras-Chave #Genomic Signature #Chaos Game Representation #Metric Representation #Chaos Game Representation #Sequences
Tipo

期刊论文