HSPIR: a manually annotated heat shock protein information resource


Autoria(s): Kumar, Ratheesh R; Nagarajan, NS; Arunraj, SP; Sinha, Devanjan; Rajan, Vinoth Babu Veedin; Esthaki, Vinoth Kumar; D'Silva, Patrick
Data(s)

2012

Resumo

Heat shock protein information resource (HSPIR) is a concerted database of six major heat shock proteins (HSPs), namely, Hsp70, Hsp40, Hsp60, Hsp90, Hsp100 and small HSP. The HSPs are essential for the survival of all living organisms, as they protect the conformations of proteins on exposure to various stress conditions. They are a highly conserved group of proteins involved in diverse physiological functions, including de novo folding, disaggregation and protein trafficking. Moreover, their critical role in the control of disease progression made them a prime target of research. Presently, limited information is available on HSPs in reference to their identification and structural classification across genera. To that extent, HSPIR provides manually curated information on sequence, structure, classification, ontology, domain organization, localization and possible biological functions extracted from UniProt, GenBank, Protein Data Bank and the literature. The database offers interactive search with incorporated tools, which enhances the analysis. HSPIR is a reliable resource for researchers exploring structure, function and evolution of HSPs.

Formato

application/pdf

Identificador

http://eprints.iisc.ernet.in/45478/1/Bioinformatics_28-21_2853_2012.pdf

Kumar, Ratheesh R and Nagarajan, NS and Arunraj, SP and Sinha, Devanjan and Rajan, Vinoth Babu Veedin and Esthaki, Vinoth Kumar and D'Silva, Patrick (2012) HSPIR: a manually annotated heat shock protein information resource. In: BIOINFORMATICS, 28 (21). pp. 2853-2855.

Publicador

OXFORD UNIV PRESS,

Relação

http://dx.doi.org/10.1093/bioinformatics/bts520

http://eprints.iisc.ernet.in/45478/

Palavras-Chave #Biochemistry
Tipo

Journal Article

PeerReviewed