Probabilistic subgroup identification using Bayesian finite mixture modelling : a case study in Parkinson’s disease phenotype identification


Autoria(s): White, Nicole; Johnson, Helen; Silburn, Peter A.; Mellick, George; Dissanayaka, Nadeeka; Mengersen, Kerrie L.
Data(s)

2012

Resumo

This article explores the use of probabilistic classification, namely finite mixture modelling, for identification of complex disease phenotypes, given cross-sectional data. In particular, if focuses on posterior probabilities of subgroup membership, a standard output of finite mixture modelling, and how the quantification of uncertainty in these probabilities can lead to more detailed analyses. Using a Bayesian approach, we describe two practical uses of this uncertainty: (i) as a means of describing a person’s membership to a single or multiple latent subgroups and (ii) as a means of describing identified subgroups by patient-centred covariates not included in model estimation. These proposed uses are demonstrated on a case study in Parkinson’s disease (PD), where latent subgroups are identified using multiple symptoms from the Unified Parkinson’s Disease Rating Scale (UPDRS).

Formato

application/pdf

application/pdf

Identificador

http://eprints.qut.edu.au/41940/

Publicador

Sage Publications

Relação

http://eprints.qut.edu.au/41940/5/41940a.pdf

http://eprints.qut.edu.au/41940/6/41940b.pdf

DOI:10.1177/0962280210391012

White, Nicole, Johnson, Helen, Silburn, Peter A., Mellick, George, Dissanayaka, Nadeeka, & Mengersen, Kerrie L. (2012) Probabilistic subgroup identification using Bayesian finite mixture modelling : a case study in Parkinson’s disease phenotype identification. Statistical Methods in Medical Research, 21(6), pp. 563-583.

Direitos

Copyright 2010 SAGE Publications

Fonte

Faculty of Science and Technology; Mathematical Sciences

Palavras-Chave #010400 STATISTICS #Classification #Finite mixture modelling #Latent class analysis #MCMC #Parkinson's disease #Uncertainty
Tipo

Journal Article